Fix #866 (#871)

deeptools · Sep 9, 2019 · 2560d13 · 2560d13
1 parent 832a22a
commit 2560d13
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diff --git a/CHANGES.txt b/CHANGES.txt
@@ -5,6 +5,7 @@
  * The Y-axis labels should once again appear in both plotHeatmap and plotProfile (issue #844). This was related to the previous point.
  * Testing is no longer performed with python 2.7, which will reach end of life in a couple months.
  * Various documentation updates (issues #868, #867 and #851).
+ * Increased support for BED files with track header lines (issue #866).
 
 3.3.0
 

diff --git a/deeptools/computeMatrixOperations.py b/deeptools/computeMatrixOperations.py
@@ -679,6 +679,8 @@ def sortMatrix(hm, regionsFileName, transcriptID, transcript_id_designator, verb
             if not labelColumn:
                 labelColumn = dti.getLabel(line)
             line = dti.getNext(fp)
+        while line.startswith("track "):
+            line = dti.getNext(fp)
 
         # Find the label column
         subtract = 0