spelling fixes

dib-lab · Mar 11, 2015 · bbf7666 · bbf7666
1 parent a4c46e0
commit bbf7666
Show file tree

Hide file tree

Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/ChangeLog b/ChangeLog
@@ -522,7 +522,7 @@
 2014-12-01  Kevin Murray  <spam@kdmurray.id.au>
 
     * tests/test_scripts.py: Stop a test from making a temporary output file
-    in the current dir by explictly specifying an output file.
+    in the current dir by explicitly specifying an output file.
 
 2014-12-01  Kevin Murray  <spam@kdmurray.id.au>
 
@@ -987,7 +987,7 @@
 2014-06-16  Michael R. Crusoe  <mcrusoe@msu.edu>
 
     * scripts/{abundance-dist-single,filter-abund-single,load-into-counting,
-    normalize-by-median,load-graph}.py: restore Python 2.6 compatability for
+    normalize-by-median,load-graph}.py: restore Python 2.6 compatibility for
     Debian 6, RedHat 6, SL6, and Ubuntu 10.04 LTS users.
 
 2014-06-15  Titus Brown  <t@idyll.org>

diff --git a/lib/read_aligner.cc b/lib/read_aligner.cc
@@ -34,7 +34,7 @@ double GetNull(size_t length)
 
 /*
   Turn two states in to a transition, or disallowed if the
-  transition isn't modeled
+  transition isn't modelled
  */
 Transition get_trans(State s1, State s2)
 {

diff --git a/sandbox/sweep-reads.py b/sandbox/sweep-reads.py
@@ -185,7 +185,7 @@ def get_parser():
     labeling = parser.add_mutually_exclusive_group(required=True)
     labeling.add_argument('--label-by-pid', dest='label_by_pid',
                           action='store_true', help='separate reads by\
-                        referece partition id')
+                        reference partition id')
     labeling.add_argument('--label-by-seq', dest='label_by_seq',
                           action='store_true', help='separate reads by\
                         reference sequence')