Skip to content
This repository was archived by the owner on Jan 6, 2021. It is now read-only.
This repository was archived by the owner on Jan 6, 2021. It is now read-only.

bam files after realignment & output_dis file #56

@bsgilgi

Description

@bsgilgi

Hello,
Thank you for the msisensor tool.
I have 2 questions:

  1. I am using bam files after the GATK workflow. Is this a valid input for msisensor?
  2. I have a question regarding the output_dis file (I am using v 0.6).
    I thought that this file has the lengths of the microstaellites. However it always has 100 values for T and for N.
    What are these values?

Thank you

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions