ApiCommonWebService

WSF Plugins that are common to all VEuPathDB genomics (ApiCommon) web sites. See WSFPlugin/src for the list of plugins.

Additionally, the CLI implementation of the HighSpeedSnpSearch system that is called by the High Speed Snp Search plugin

Dependencies

• ant
• Perl 5
• Java 11+
• External dependencies: see pom.xml
• environment variables for GUS_HOME and PROJECT_HOME
• Internal Dependencies: see build.xml

Installation instructions.

• bld ApiCommonWebService

Manifest

• WSFPlugin/config :: configuration for individual plugins
• WSFPlugin/lib :: conifer and perl libraries for the plugins
• WSFPlugin/src :: java source code for the plugins
• HighSpeedSnpSearch/bin :: executables for HSSS
• HighSpeedSnpSearch/doc :: docs for HSSS
• HighSpeedSnpSearch/lib/perl :: perl libraries for HSSS
• HighSpeedSnpSearch/src/c :: C src for HSSS
• HighSpeedSnpSearch/test :: tests for HSSS