- Sweden
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14:49
- 1h ahead - https://ki.se/personer/daniel-nilsson
- https://orcid.org/0000-0001-5831-385X
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Ribbon Public
Forked from MariaNattestad/RibbonA genome browser designed for complex structural variants and long reads.
JavaScript MIT License UpdatedDec 12, 2024 -
rhocall Public
Call regions of homozygosity and make tentative UPD calls
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biowasm Public
Forked from biowasm/biowasmWebAssembly modules for genomics
HTML MIT License UpdatedOct 23, 2024 -
loqusdb Public
Forked from Clinical-Genomics/loqusdbA simple observation count database
Python MIT License UpdatedSep 27, 2024 -
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human-phenotype-ontology Public
Forked from obophenotype/human-phenotype-ontologyOntology for the description of human clinical features
Makefile Other UpdatedOct 19, 2023 -
phenopacket-api Public
Forked from squeezeday/phenopacket-apiTypeScript MIT License UpdatedJun 12, 2023 -
cghtxt2vcf Public
Convert cgh txt dump to vcf
Python GNU General Public License v3.0 UpdatedNov 25, 2022 -
AMYCNE Public
Forked from J35P312/AMYCNEA copy number estimation toolkit
Python UpdatedSep 7, 2021 -
mitosign Public
mtDNA deletion and depletion signatures from wgs data
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FluFFyPipe Public
Forked from J35P312/fluffyFetaL AneUploidy and FetalFraction analYsis Pipeline
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SVDB Public
Forked from J35P312/SVDBstructural variant database software
Python MIT License UpdatedJan 20, 2020 -
ExpansionHunter Public
Forked from Illumina/ExpansionHunterA tool for estimating repeat sizes
C++ GNU General Public License v3.0 UpdatedDec 12, 2019 -
chromograph Public
Forked from mikaell/chromographGenetics graphing tool
Python MIT License UpdatedSep 24, 2019 -
reference-files Public
Forked from Clinical-Genomics/reference-filesSmall reference files
UpdatedAug 13, 2019 -
trailblazer Public
Forked from henrikstranneheim/trailblazerKeep track of and manage analyses
Python MIT License UpdatedJul 25, 2019 -
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pyCancerSig Public
Forked from jessada/pyCancerSigpython package for deciphering cancer signature
Python GNU General Public License v3.0 UpdatedFeb 19, 2019 -
stranger Public
Forked from Clinical-Genomics/strangerTool to annotate outfiles from ExpansionHunter with the pathologic implications of the repeat
Python MIT License UpdatedNov 30, 2018 -
genmod Public
Forked from Clinical-Genomics/genmodAnnotate models of genetic inheritance patterns in variant files (vcf files)
Python MIT License UpdatedNov 15, 2018 -
scout Public
Forked from Clinical-Genomics/scoutVCF visualization interface
Python BSD 3-Clause "New" or "Revised" License UpdatedJun 26, 2018 -
vcf2cytosure Public
Forked from NBISweden/vcf2cytosureConvert VCF with structural variations to CytoSure format
MIT License UpdatedApr 6, 2017 -
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cyvcf2 Public
Forked from brentp/cyvcf2cython + htslib == fast VCF and BCF processing
C MIT License UpdatedDec 5, 2016 -
ClinGeneLists Public
Gene lists and some elementary tools for handling them.
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FindTranslocations Public
Forked from SciLifeLab/TIDDITFindTranslocations
C++ Other UpdatedAug 24, 2016 -
puzzle Public
Forked from robinandeer/puzzleA new secret project :P
Python MIT License UpdatedApr 27, 2016 -
FindSV_core Public
Forked from J35P312/FindSV_corea core module of FindV used to analyse only one chosen bam file
Python UpdatedApr 5, 2016 -
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CNVnator Public
Forked from abyzovlab/CNVnatora tool for CNV discovery and genotyping from depth-of-coverage by mapped reads
C++ Other UpdatedMar 10, 2016