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drpatelh committed Sep 22, 2021
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Expand Up @@ -674,7 +674,7 @@ A number of genome-specific files are generated by the pipeline because they are

* `pipeline_info/`
* Reports generated by Nextflow: `execution_report.html`, `execution_timeline.html`, `execution_trace.txt` and `pipeline_dag.dot`/`pipeline_dag.svg`.
* Reports generated by the pipeline: `pipeline_report.html`, `pipeline_report.txt` and `software_versions.tsv`.
* Reports generated by the pipeline: `pipeline_report.html`, `pipeline_report.txt` and `software_versions.tsv`. The `pipeline_report*` files will only be present if the `--email` parameter is used when running the pipeline.
* Reformatted samplesheet files used as input to the pipeline: `samplesheet.valid.csv`.

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