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1. PyRate PyRate Public

   PyRate is a program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework.

   Python 80 36

2. fossilBM fossilBM Public

   Bayesian inference of trait evolution under a “fossilized” Brownian motion.

   R 7 3

3. npBNN npBNN Public

   Bayesian neural networks using Numpy and Scipy

   Python 11 3

4. LiteRate LiteRate Public

   Fast estimation of immigration, birth and death rates from large datasets using reversible jump MCMC

   Python 13 3

5. azizka/sampbias azizka/sampbias Public

   Sampbias is a method and tool to 1) visualize the distribution of occurrence records and species in any user-provided dataset, 2) quantify the biasing effect of geographic features related to human…

   R 33 8

6. AntonelliLab/raxmlGUI AntonelliLab/raxmlGUI Public

   A new graphical interface for RAxML

   JavaScript 21 4