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* Store change of sonar.login to sonar.token. * Hotfix to develop, updating aclocal.m4 and config.h.in to what is created when running bootstrap inside the dtcenter/met-base:v3.1 Docker image. Updates autoconf 2.69 output to 2.71. * Adding -lnetcdf to configure_lib_args for NetCDF-CXX compilation * Added eckit and atlas loads and paths * Added atlas and eckit loads and paths * Changing -j to "-j 5" as the recommended value * Update ensemble-stat.rst Fixed incorrect path to obs error table * Updated values for GRIB2CLIB_NAME and BUFRLIB_NAME * Updated for proj, eckit, and atlas * Feature #2761 develop seneca (#2762) * Per #2761, define runtime python version for testing rather than using the default version which no longer exists in /usr/local * Per #2761, fix setting ci-skip-all * Per #2761, patching test_util.R to use the -C command line option for ncdiff. I did test running comp_dir.sh with this change and confirmed that it now runs to completion. * #2652 Added find_var_by_standard_name and separated common codes to find_xy_vars * #2757 Get the email list from the environment variable MET_CRON_EMAIL_LIST__MET (or MET_CRON_EMAIL_LIST_) * #2757 THe SonarQube token and URL are replaced by ujsing the environment variable SONAR_TOKEN_VALUE and SONAR_SERVER_URL * #2757 The SonarQube token and URL are replaced with the pre-defined strings, SONAR_TOKEN_VALUE and SONAR_SERVER_URL * Bugfix #2670 develop --enable-python (#2768) * Update install_met_env.acorn_py3.10 * Update install_met_env.wcoss2_py3.10 * Feature #2776 cleanup (#2777) * Per #2776, delete stale prob_pair_info.h/.cc, wwmca_utils.h/.cc, and rmw_analysis_utils.h/.cc files that were not being compiled by their Makefiles. * Per #2776, update Makefile to compile the test_read_rmw utility. * Per #2776, add Makefile for the vx_python3_utils test utility directory. * add rpath for atlas and eckit lib dirs so dynamic libraries can be found when running on seneca * only set -L and -I arguments for atlas and eckit if the appropriate environment variable is set -- this matches how it is handled for other external library dependencies * Per #2776, just whitespace and capitalization --------- Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> * Bugfix #2782 develop MASSDEN (#2783) * Per #2782, port over fixes from the bugfix_2782_main_v11.1_MASSDEN branch over to the bugfix branch for develop. Will also add new GRIB2 filtering options in this branch. * Per #2782, add support for 4 new GRIB2 filtering options for GRIB2_aerosol_type, GRIB2_aerosol_interval_type, GRIB2_aerosol_size_lower, and GRIB2_aerosol_size_upper. These are useful in filtering the MASSDEN records in the RRFS smoke output files. * Per #2782, fix aerosol_size_lower() and aersol_size_upper() inline definitions. * Per #2782, add a unit test for GRIB2 table 4.48. * Per #2782, switch from strict equality to using the is_eq() function when checking the GRIB2_aerosol_size_lower and upper values since they're doubles and not ints. --------- Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu> Co-authored-by: root <root@83062d57c5dd> Co-authored-by: Julie Prestopnik <jpresto@ucar.edu> Co-authored-by: Christina Kalb <kalb@ucar.edu> Co-authored-by: John Halley Gotway <johnhg@ucar.edu> Co-authored-by: Howard Soh <hsoh@seneca.rap.ucar.edu> Co-authored-by: Howard Soh <hsoh@ucar.edu> Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> Co-authored-by: metplus-bot <97135045+metplus-bot@users.noreply.github.com>
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| name: Compilation Options | ||
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| # Test matrix of MET configuration/compilation options | ||
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| on: | ||
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| # Note that scheduled cron events are run on the default branch. | ||
| # Enable this schedule when main_v12.0 becomes the default branch. | ||
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| # schedule: | ||
| # - cron: '0 7 * * 0'' | ||
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| push: | ||
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| tags: | ||
| - '**' | ||
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| workflow_dispatch: | ||
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| env: | ||
| DOCKERHUB_REPO: dtcenter/met-dev | ||
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| jobs: | ||
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| job_control: | ||
| name: Determine which jobs to run | ||
| runs-on: ubuntu-latest | ||
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| steps: | ||
| - uses: actions/checkout@v3 | ||
| - name: Set job controls | ||
| id: job_status | ||
| run: .github/jobs/set_job_controls.sh | ||
| env: | ||
| commit_msg: ${{ github.event.head_commit.message }} | ||
| force_tests: ${{ github.event.inputs.force_tests }} | ||
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| outputs: | ||
| met_base_repo: ${{ steps.job_status.outputs.met_base_repo }} | ||
| met_base_tag: ${{ steps.job_status.outputs.met_base_tag }} | ||
| branch_name: ${{ steps.job_status.outputs.branch_name }} | ||
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| compile: | ||
| name: Config Opts | ||
| runs-on: ubuntu-latest | ||
| needs: job_control | ||
| strategy: | ||
| matrix: | ||
| config_opts: | ||
| - '' | ||
| - '--enable-all' | ||
| - '--enable-grib2' | ||
| - '--enable-python' | ||
| - '--enable-ugrid' | ||
| - '--enable-lidar2nc' | ||
| - '--enable-mode_graphics' | ||
| - '--enable-modis' | ||
| fail-fast: false | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
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| - name: Create directories to store output | ||
| run: mkdir -p ${RUNNER_WORKSPACE}/logs | ||
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| - name: Compile MET in Docker | ||
| run: .github/jobs/build_docker_image.sh | ||
| env: | ||
| SOURCE_BRANCH: ${{ needs.job_control.outputs.branch_name }} | ||
| MET_BASE_REPO: ${{ needs.job_control.outputs.met_base_repo }} | ||
| MET_BASE_TAG: ${{ needs.job_control.outputs.met_base_tag }} | ||
| MET_CONFIG_OPTS: ${{ matrix.config_opts }} | ||
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| - name: Copy all build log files into logs directory | ||
| if: always() | ||
| run: cp ${GITHUB_WORKSPACE}/*.log ${RUNNER_WORKSPACE}/logs/ | ||
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| - name: Upload logs as artifact | ||
| if: always() | ||
| uses: actions/upload-artifact@v3 | ||
| with: | ||
| name: logs | ||
| path: ${{ runner.workspace }}/logs | ||
| if-no-files-found: ignore | ||
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