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Enhance Series-Analysis to compute statistics from the GRAD line type #3030
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…Stat to the common area and then referencing it in both Grid-Stat and Series-Analysis.
…dictionary and an entry for output_stats.gradient. Update the conf_info source code to parse them. Still need to update OTHER Series-Analysis config files and also update the logic in series_analysis.cc to compute GRAD statistics.
@KathrynNewman question for you. I'm adding the
Grid-Stat supports an arbitrary number of gradients being computed. Wondering whether Series-Analysis should do the same or only support a single As we discussed in person, I'll proceed with supporting a list of |
…ong_name attribute of the Series-Analysis output files.
…crementally across multiple runs. However, this can only be done when requesting that 'ALL' GRAD columns be written.
…lumns to met_header_columns_v12.0.txt to make it easier to parse the output from MET.
* Per #3033, update version info, consolidate release notes, and add upgrade instructions. * Per #3033, remove all instances of 'Bugfix: ' from the release notes since it's redundant with the dropdown name * Per #3030, based on request from Randy Pierce, also add MTD header columns to met_header_columns_v12.0.txt to make it easier to parse the output from MET. * Per #3033, fix typo and correct alignment in table
* Per #3024, roll the version number from 12.0 to 12.1 prior to adding new columns to the existing GRAD line type. * Per #3024, return bad data for the square root of a negative number * Per #3024, update Grid-Stat to write 4 new columns to the GRAD line type. * Per #3024, tweak laplace MSE computation * Per #3024, add appendixC.rst equations for the new statistics * Per #3024, escape embedded underscores in equations only for latex formatting, not html * Per #3024, add reference to paper and summary of the new gradient stats * Per #3030, update docs by moving the gradient config entry from Grid-Stat to the common area and then referencing it in both Grid-Stat and Series-Analysis. * Per #3030, update Series-Analysis config file by adding the gradient dictionary and an entry for output_stats.gradient. Update the conf_info source code to parse them. Still need to update OTHER Series-Analysis config files and also update the logic in series_analysis.cc to compute GRAD statistics. * Per #3030, add descriptions of GRAD statistics for inclusion in the long_name attribute of the Series-Analysis output files. * Per #3030, add the GRADInfo::get_stat() member function to be called by Series-Analysis * Per #3030, fix parsing logic for the gradient dictionary. * Per #3030, add gradient entries to existing Series-Analysis config files * Per #3030, add GRADInfo::set_stat() member function * Per #3030, enhance Series-Analysis to aggregate the GRAD line type incrementally across multiple runs. However, this can only be done when requesting that 'ALL' GRAD columns be written. * Per #3030, reduce the volume of SonarQube code smells. * Updated syntax * Updated syntax * Updated syntax --------- Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu> Co-authored-by: j-opatz <59586397+j-opatz@users.noreply.github.com>
* use custom GitHub Action to trigger METplus use cases * Updating values * Bugfix #3020 main_v12.0 grid_stat_seeps (#3022) * Per #3020, add missing GridStatNcOutInfo::do_seeps flag and use it to determine if SEEPS information should be written to the Grid-Stat NetCDF matched pairs output file. * Unrelated to #3020, fix broken NetCDF cf-conventions links in the User's Guide. * Per #3020, no real changes. Just whitespace * Update to reflect usage of oneAPI compilers * Updating file to reflect usage of oneAPI compilers * Hotfix to the main_v12.0 branch after PR #3022 fixed a SEEPS bug. The GridStatConfig_SEEPS config file needs to be updated with nc_pairs_flag.seeps = TRUE in order for the same output to be produced by the unit tests. * Adding In Memoriam * Feature #3032 main_v12.0 docs data type (#3040) * Per #3032, add data type column to all of the output tables * Per #3032, remove the first row from each output table since its info is repeated from the table name. Additional changes for consistency and accuracy in column names. * Update docs/Users_Guide/gsi-tools.rst Co-authored-by: Julie Prestopnik <jpresto@ucar.edu> --------- Co-authored-by: Julie Prestopnik <jpresto@ucar.edu> * Making a superficial change in the main_v12.0 branch to trigger GHA to create and push an updated test output image. * Feature #3033 v12.0.0 (#3042) * Per #3033, update version info, consolidate release notes, and add upgrade instructions. * Per #3033, remove all instances of 'Bugfix: ' from the release notes since it's redundant with the dropdown name * Per #3030, based on request from Randy Pierce, also add MTD header columns to met_header_columns_v12.0.txt to make it easier to parse the output from MET. * Per #3033, fix typo and correct alignment in table * Update install_met_env.acorn Removing reference to beta version * Update install_met_env.cactus Remove references to beta version * Update install_met_env.cactus Update paths for eckit and atlas * Update install_met_env.wcoss2 Remove beta references * Fix typo, missing one * to make SciPy bold in appendixF.rst * Per #3051, update unit tests so that installed files are found relative to MET_BASE (<install_loc>/share/met) and other files that are only in the MET repo are found relative to MET_TEST_BASE (MET/internal/test_unit). Also remove MET_BUILD_BASE env var (#3052) * Bugfix #3054 main_v12.0 parusr (#3068) * Per #3054, fix PARUSR BUFRLIB error by solving the upstream reference to temporary memory returned by c_str(). Store a copy of the temporary variable name in a string rather than a pointer to temporary memory. Note that I checked all other calls to c_str() in pb2nc.cc and found these 2 instances to be only problematic ones. All others are used as arguments to functions for which a copy is made. * Unrelated to #3054, but discovered while investigating the dtcenter/METplus#2875 discussion, the PairBase::calc_obs_summary() function loops over map entries and attempts to update the mapped 'summary_val' value. However, the current version only updates it in a copy and not what's actually in the map. This changes how we loop over the map to actually udpate its contents. Note that the only impact is fixing a log file to accurately report the 'summary_val'. So this is really a logging bug. * Per #3054, revert emplace_back() to its original push_back() to make the bugfix diffs as limited as possible. * Per #3054, correct bugfix in PairBase::calc_obs_summary() in pair_base.cc --------- Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu> * Per #3070, updates for the 12.0.1 bugfix release. (#3071) --------- Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> Co-authored-by: Julie Prestopnik <jpresto@ucar.edu> Co-authored-by: John Halley Gotway <johnhg@ucar.edu> Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu> Co-authored-by: metplus-bot <97135045+metplus-bot@users.noreply.github.com>
Describe the Enhancement
MET #3024 adds 4 new columns to the GRAD line type written by Grid-Stat to quantify sharpness. This issue is to enhance Series-Analysis to compute the statistics from the GRAD line type to enable sharpness to be assessed spatially.
Recommend reconfiguring an existing unit test for Series-Analysis to also compute GRAD statistics.
Time Estimate
2 days?
Sub-Issues
Consider breaking the enhancement down into sub-issues.
None needed.
Relevant Deadlines
To be completed by 12/30 and charged to the METplus NRL project.
Funding Source
METplus NRL project (7730022)
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