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Update main_v11.0-ref after #2494 #2498

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8431ccf
Cleanup. Remove file inadvertently added during development.
JohnHalleyGotway Dec 12, 2022
a953921
Fix testing.yml in main_v11.0 branch to ignore the docs directory.
JohnHalleyGotway Dec 13, 2022
4e3fd45
Feature update installation (#2384)
jprestop Dec 21, 2022
3b38681
Bugfix #2389 main_v11.0 flowchart (#2391)
JohnHalleyGotway Dec 28, 2022
4be3263
Add in the MET-10.1.0 flowchart.
JohnHalleyGotway Dec 29, 2022
2943b15
#2370 checking NaN and print out "NA" to avoid an Exception
Jan 9, 2023
aad4de3
#2370 AOD 550 is interpolated only AOD 440 and 650 are not negative v…
Jan 9, 2023
c1f1d20
Merge pull request #2394 from dtcenter/bugfix_2370_aeronetv3
hsoh-u Jan 10, 2023
5530c86
Per #2399 fix definitions of G172 and G220 based on comments in NOAA-…
JohnHalleyGotway Jan 15, 2023
6cb0ef4
Bugfix #2380 main_v11.0 override (#2381)
JohnHalleyGotway Jan 17, 2023
f7e439d
Bugfix #2408 main_v11.0 empty config (#2409)
JohnHalleyGotway Jan 17, 2023
285d4c3
#2387 Do not increase n_file_obs when n_derived_obs is increased
Jan 17, 2023
e53b4d1
Bugfix #2390 main_v11.0 fix compiling hdf5 with zlib and handle NetCD…
georgemccabe Jan 18, 2023
681dec5
Merge pull request #2411 from dtcenter/bugfix_2387_pb2nc_obs_count_ma…
hsoh-u Jan 18, 2023
4f81f59
#2228 Added parameters for ellipsoidal earth
Jan 20, 2023
d06a6f5
#2228 Added functions for ellipsoidal earth
Jan 20, 2023
56f79f7
#2218 Support polar stereographics without scale_factor and ellipsoid…
Jan 20, 2023
29945fe
#2218 Addedmrtwo unit tests for polar stereographics
Jan 21, 2023
dc7ec94
#2218 convert index to meter at xy_to_latlon
Jan 23, 2023
2dcc274
#2218 Check eccentricity
Jan 23, 2023
a04888e
#2218 Changed the order of members
Jan 23, 2023
e452aef
#2218 Initialize newly added members
Jan 23, 2023
c3b3b9a
Bugfix #2415 main_v11.0 modulefiles (#2416)
jprestop Jan 25, 2023
5d36e95
Bugfix #2412 main_v11.0 climo (#2420)
JohnHalleyGotway Jan 25, 2023
fe1495f
#2218 Added dy_km
Jan 31, 2023
6ee856b
#2218 Adjusted meters to index at latlon_to_xy & xy_to_latlon
Jan 31, 2023
e37c837
#2218 Removed a warning for ellipsoidal earth
Jan 31, 2023
5b6f2bb
Merge pull request #2419 from dtcenter/feature_2218_polar_stereograph…
hsoh-u Feb 2, 2023
91b5910
Merge branch 'main_v11.0-ref' into main_v11.0
JohnHalleyGotway Feb 2, 2023
2adc503
#2218 Initialize polar stereographics parametres for ellipsoial earth
Feb 2, 2023
568223f
#2218 Initialize polar stereographics parameters for ellipsoidal earth
Feb 2, 2023
340358f
Merge pull request #2435 from dtcenter/feature_2218_polar_stereograph…
hsoh-u Feb 3, 2023
0123464
Bugfix #2426 main_v11.0 buoy (#2432)
JohnHalleyGotway Feb 4, 2023
245ebe9
Bugfix #2437 main_v11.0 convert (#2438)
JohnHalleyGotway Feb 15, 2023
272f41d
Hotfix for main_v11.0, for #2437, forgot one reference to the search_…
JohnHalleyGotway Feb 16, 2023
b906ce9
Merge branch 'main_v11.0-ref' into main_v11.0
JohnHalleyGotway Feb 16, 2023
1b6dad6
Modifying files for installation on WCOSS2 with python3.10, including…
jprestop Feb 17, 2023
ce07db1
Bugfix 2428 python from env main v11.0 (#2443)
hsoh-u Feb 20, 2023
e4370ce
Per #2428, hotfix to the main_v11.0 branch to remove references to ME…
JohnHalleyGotway Feb 20, 2023
01c7f84
Update .readthedocs.yaml
jprestop Feb 21, 2023
4e85a0d
Update .readthedocs.yaml
jprestop Feb 21, 2023
75f0bb6
Update .readthedocs.yaml
jprestop Feb 21, 2023
911c312
Bugfix 2428 python csv input (#2450)
hsoh-u Feb 21, 2023
beb95b4
Bugfix #2452 main_v11.0 airnow (#2453)
JohnHalleyGotway Feb 21, 2023
04bd3c0
Bugfix #2402 main_v11.0 sonarqube (First PR) (#2447)
JohnHalleyGotway Feb 21, 2023
0968618
Feature #2442 v11.0.1-rc1 (#2455)
JohnHalleyGotway Feb 21, 2023
1868d2e
Merge branch 'main_v11.0-ref' into main_v11.0
JohnHalleyGotway Feb 21, 2023
fc44d23
Bugfix #2449 main_v11.0 pdf (#2465)
JohnHalleyGotway Feb 24, 2023
89d32c0
Bugfix 2428 python csv input (#2467)
hsoh-u Feb 27, 2023
9bdc9e6
Create LICENSE.md
JohnHalleyGotway Feb 27, 2023
a71ebc0
Per METplus Discussion dtcenter/METplus#2063 from @RogerHar, the igno…
JohnHalleyGotway Feb 28, 2023
11c4d3d
Feature #2472 v11.0.1 (#2478)
JohnHalleyGotway Feb 28, 2023
bc36fd0
Added a new MET_PYTHON_LIB variable to account for a need to use a li…
jprestop Feb 28, 2023
20ff4f2
Updated MET_PYTHON_LD for Python 3.10 on WCOSS2
jprestop Feb 28, 2023
5c5bc5a
Added module load ve/evs/1.0
jprestop Mar 1, 2023
36cf66d
Update install_met_env.generic
jprestop Mar 3, 2023
16e0e3c
#2482 Check if the string value is a datestring first. Then check if …
Mar 6, 2023
c200ee2
Merge pull request #2484 from dtcenter/bugfix_2482_timeslicing_yyyymm…
hsoh-u Mar 9, 2023
ef8d12a
#2493 Update lat/lon/elv when station_id (site_name) is changed
Mar 29, 2023
f6b0f16
#2493 Update lat/lon/elv when station_id (site_name) is changed
Mar 29, 2023
946bb80
#2493 Removed update_lat_lon
Mar 29, 2023
2692694
checks lat/lon/elv index which are not available for version 1 and 2
Mar 30, 2023
14a2621
Merge pull request #2494 from dtcenter/bugfix_2493_aeronet3_lat_lon_elv
hsoh-u Mar 30, 2023
f08559a
Feature 2496 v11.0.2 (#2497)
jprestop Mar 30, 2023
d3865ad
Merge branch 'main_v11.0-ref' into main_v11.0
JohnHalleyGotway Mar 31, 2023
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2 changes: 1 addition & 1 deletion .readthedocs.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ version: 2

# Build all formats (htmlzip, pdf, epub)
#formats: all
#formats: [pdf]
formats: [pdf]

# Optionally set the version of Python and requirements required to build your
# docs
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174 changes: 174 additions & 0 deletions LICENSE.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,174 @@
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51 changes: 41 additions & 10 deletions docs/Users_Guide/appendixC.rst
Original file line number Diff line number Diff line change
Expand Up @@ -765,17 +765,18 @@ where the weights are applied at each grid location, with values assigned accord

.. only:: latex

.. math::
.. math::

\text{S1\_OG} = \frac{\text{EGBAR}}{\text{OGBAR}}

\text{FGOG\_RATIO} = \frac{\text{FGBAR}}{\text{OGBAR}}

.. only:: html

.. math::
.. math::

\text{S1_OG} = \frac{\text{EGBAR}}{\text{OGBAR}}

\text{FGOG_RATIO} = \frac{\text{FGBAR}}{\text{OGBAR}}


Expand Down Expand Up @@ -989,7 +990,7 @@ Let :math:`\text{J}` be the number of categories, then both the forecast, :math:
:math:`F_m = \sum_{j=1}^m (f_j)` and :math:`O_m = \sum_{j=1}^m (o_j), m = 1,…,J`.


To clarify, :math:`F_1 = f_1` is the first component of :math:`F_m`, :math:`F_2 = f_1+f_2`, etc., and :math:`F_J = 1`. Similarly, if :math:`o_j = 1` and :math:`i < j`, then :math:`O_i = 0` and when :math:`ij`, :math:`O_i = 1`, and of course, :math:`O_J = 1`. Finally, the RPS is defined to be:
To clarify, :math:`F_1 = f_1` is the first component of :math:`F_m`, :math:`F_2 = f_1+f_2`, etc., and :math:`F_J = 1`. Similarly, if :math:`o_j = 1` and :math:`i < j`, then :math:`O_i = 0` and when :math:`i >= j`, :math:`O_i = 1`, and of course, :math:`O_J = 1`. Finally, the RPS is defined to be:

.. math:: \text{RPS} = \sum_{m=1}^J (F_m - O_m)^2 = \sum_{m=1}^J BS_m,

Expand Down Expand Up @@ -1018,11 +1019,23 @@ The score can be interpreted as a continuous version of the mean absolute error

To calculate crps_emp_fair (bias adjusted, empirical ensemble CRPS) for each individual observation with m ensemble members:

.. math:: \text{crps_emp_fair}_i = \text{crps_emp}_i - \frac{1}{2*m} * \frac{1}{m*(m-1)} \sum_{i \ne j}|f_{i} - f_{j}|
.. only:: latex

.. math:: \text{crps\_emp\_fair}_i = \text{crps\_emp}_i - \frac{1}{2*m} * \frac{1}{m*(m-1)} \sum_{i \neq j}|f_{i} - f_{j}|

.. only:: html

.. math:: \text{crps_emp_fair}_i = \text{crps_emp}_i - \frac{1}{2*m} * \frac{1}{m*(m-1)} \sum_{i \neq j}|f_{i} - f_{j}|

The overall CRPS_EMP_FAIR is calculated as the average of the individual measures. In equation form:

.. math:: \text{CRPS_EMP_FAIR} = \text{average(crps_emp_fair) } = \frac{1}{N} \sum_{i=1}^N \text{crps_emp_fair}_i
.. only:: latex

.. math:: \text{CRPS\_EMP\_FAIR} = \text{average(crps\_emp\_fair) } = \frac{1}{N} \sum_{i=1}^N \text{crps\_emp\_fair}_i

.. only:: html

.. math:: \text{CRPS_EMP_FAIR} = \text{average(crps_emp_fair) } = \frac{1}{N} \sum_{i=1}^N \text{crps_emp_fair}_i

Ensemble Mean Absolute Difference
---------------------------------
Expand All @@ -1031,11 +1044,23 @@ Called "SPREAD_MD" in ECNT output :numref:`table_ES_header_info_es_out_ECNT`

The ensemble mean absolute difference is an alternative measure of ensemble spread. It is computed for each individual observation (denoted by a lowercase spread_md) with m ensemble members:

.. math:: \text{spread_md}_i = \frac{1}{m*(m-1)} \sum_{i \ne j}|f_{i} - f_{j}|
.. only:: latex

.. math:: \text{spread\_md}_i = \frac{1}{m*(m-1)} \sum_{i \neq j}|f_{i} - f_{j}|

.. only:: html

.. math:: \text{spread_md}_i = \frac{1}{m*(m-1)} \sum_{i \neq j}|f_{i} - f_{j}|

The overall SPREAD_MD is calculated as the average of the individual measures. In equation form:

.. math:: \text{SPREAD_MD} = \text{average(spread_md) } = \frac{1}{N} \sum_{i=1}^N \text{spread_md}_i
.. only:: latex

.. math:: \text{SPREAD\_MD} = \text{average(spread\_md) } = \frac{1}{N} \sum_{i=1}^N \text{spread\_md}_i

.. only:: html

.. math:: \text{SPREAD_MD} = \text{average(spread_md) } = \frac{1}{N} \sum_{i=1}^N \text{spread_md}_i

A perfect forecast would have ensemble mean absolute difference = 0.

Expand All @@ -1057,7 +1082,13 @@ Called "BIAS_RATIO" in ECNT output :numref:`table_ES_header_info_es_out_ECNT`

The bias ratio (BIAS_RATIO) is computed when verifying an ensemble against gridded analyses or point observations. It is defined as the mean error (ME) of ensemble member values greater than or equal to the observation value to which they are matched divided by the absolute value of the mean error (ME) of ensemble member values less than the observation values.

.. math:: \text{BIAS_RATIO} = \frac{ \text{ME}_{f >= o} }{ |\text{ME}_{f < o}| }
.. only:: latex

.. math:: \text{BIAS\_RATIO} = \frac{ \text{ME}_{f >= o} }{ |\text{ME}_{f < o}| }

.. only:: html

.. math:: \text{BIAS_RATIO} = \frac{ \text{ME}_{f >= o} }{ |\text{ME}_{f < o}| }

A perfect forecast has ME = 0. Since BIAS_RATIO is computed as the high bias (ME_GE_OBS) divide by the absolute value of the low bias (ME_LT_OBS), a perfect forecast has BIAS_RATIO = 0/0, which is undefined. In practice, the high and low bias values are unlikely to be 0.

Expand All @@ -1070,7 +1101,7 @@ Called "IGN" in ECNT output :numref:`table_ES_header_info_es_out_ECNT`

The ignorance score (IGN) is the negative logarithm of a predictive probability density function (:ref:`Gneiting et al., 2004 <Gneiting-2004>`). In MET, the IGN is calculated based on a normal approximation to the forecast distribution (i.e. a normal pdf is fit to the forecast values). This approximation may not be valid, especially for discontinuous forecasts like precipitation, and also for very skewed forecasts. For a single normal distribution **N** with parameters :math:`\mu \text{ and } \sigma`, the ignorance score is

.. math:: \text{ign} (N( \mu, \sigma),y) = \frac{1}{2} \ln (2 \pi \sigma^2 ) + \frac{(y - \mu)^2}{\sigma^2}.
.. math:: \text{ign} (N( \mu, \sigma),y) = \frac{1}{2} \ln (2 \pi \sigma^2 ) + \frac{(y - \mu)^2}{2\sigma^2}.

Accumulation of the ignorance score for many forecasts is via the average of individual ignorance scores. This average ignorance score is the value output by the MET software. Like many error statistics, the IGN is negatively oriented, so smaller numbers indicate better forecasts.

Expand Down
13 changes: 11 additions & 2 deletions docs/Users_Guide/release-notes.rst
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,16 @@ When applicable, release notes are followed by the GitHub issue number which des
enhancement, or new feature (`MET GitHub issues <https://github.com/dtcenter/MET/issues>`_).
Important issues are listed **in bold** for emphasis.

MET Version 11.0.1-rc1 release notes (20230221)
-----------------------------------------------
MET Version 11.0.2 release notes (20230330)
-------------------------------------------

* Bugfixes:

* Bugfix: Fix support for the YYYYMMDD format in NetCDF level timestrings (`#2482 <https://github.com/dtcenter/MET/issues/2482>`_).
* Bugfix: AERONET the lat/lon is not changed with different station ID (`#2493 <https://github.com/dtcenter/MET/issues/2493>`_).

MET Version 11.0.1 release notes (20230228)
-------------------------------------------

* Bugfixes:

Expand All @@ -27,6 +35,7 @@ MET Version 11.0.1-rc1 release notes (20230221)
* Bugfix: Fix ASCII2NC to handle missing NDBC buoy location information (`#2426 <https://github.com/dtcenter/MET/issues/2426>`_).
* Bugfix: Fix the MET vx_pointdata_python library to handle MET_PYTHON_EXE for python embedding of point observations (`#2428 <https://github.com/dtcenter/MET/issues/2428>`_).
* Bugfix: Refine the regrid dictionary's data conversion and censoring operations and fix climo time matching logic for a single monthly climo file (`#2437 <https://github.com/dtcenter/MET/issues/2437>`_).
* Bugfix: Fix the creation of the MET User's Guide PDF (`#2449 <https://github.com/dtcenter/MET/issues/2449>`_).
* Bugfix: Fix inconsistent ASCII2NC AIRNOW location lookup logic (`#2452 <https://github.com/dtcenter/MET/issues/2452>`_).

MET Version 11.0.0 release notes (20221209)
Expand Down
4 changes: 2 additions & 2 deletions docs/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -20,11 +20,11 @@
project = 'MET'
author = 'UCAR/NCAR, NOAA, CSU/CIRA, and CU/CIRES'
author_list = 'Opatz, J., T. Jensen, J. Prestopnik, H. Soh, L. Goodrich, B. Brown, R. Bullock, J. Halley Gotway, K. Newman'
version = '11.0.1-rc1'
version = '11.0.2'
verinfo = version
release = f'{version}'
release_year = '2023'
release_date = f'{release_year}-02-21'
release_date = f'{release_year}-03-30'
copyright = f'{release_year}, {author}'

# -- General configuration ---------------------------------------------------
Expand Down
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