Feature 615 gfdl tc tracking

.github/actions/run_tests/Dockerfile.gempak → .github/actions/run_tests/Dockerfile.run_gempak

@@ -1,4 +1,4 @@
-ARG METPLUS_ENV_TAG=metplus_base
+ARG METPLUS_ENV_TAG=gempak
 ARG METPLUS_IMG_TAG=develop
 
 FROM dtcenter/metplus-envs:${METPLUS_ENV_TAG} as env

.github/actions/run_tests/Dockerfile.run_gfdl

@@ -0,0 +1,11 @@
+ARG METPLUS_ENV_TAG=gfdl-tracker
+ARG METPLUS_IMG_TAG=develop
+
+FROM dtcenter/metplus-envs:${METPLUS_ENV_TAG} as env
+
+ARG METPLUS_IMG_TAG=develop
+FROM dtcenter/metplus-dev:${METPLUS_IMG_TAG}
+
+COPY --from=env /usr/local/lib/libnetcdf.so.19* /usr/local/lib/
+COPY --from=env /usr/local/lib/libnetcdff* /usr/local/lib/
+COPY --from=env /standalone_gfdl-vortextracker_v3.9a_gcc/trk_exec/* /usr/local/bin/

.github/jobs/setup_and_run_use_cases.py

@@ -70,11 +70,12 @@ def main():
         else:
             env_tag = 'metplus_base'
 
-        # get Dockerfile to use (gempak if using gempak)
+        # get Dockerfile to use
+        dockerfile_name = 'Dockerfile.run'
         if 'gempak' in str(requirements).lower():
-            dockerfile_name = 'Dockerfile.gempak'
-        else:
-            dockerfile_name = 'Dockerfile.run'
+            dockerfile_name = f'{dockerfile_name}_gempak'
+        elif 'gfdl' in str(requirements).lower():
+            dockerfile_name = f'{dockerfile_name}_gfdl'
 
         docker_build_cmd = (
             f"docker build -t {run_tag} "

.github/parm/test_settings.conf

@@ -10,4 +10,7 @@ LOG_METPLUS = {LOG_DIR}/metplus.log
 LOG_TIMESTAMP_TEMPLATE =
 
 # also set path to GempakToCF.jar for GEMPAK use cases
-GEMPAKTOCF_JAR = /data/input/GempakToCF.jar
+GEMPAKTOCF_JAR = /data/input/GempakToCF.jar
+
+# also set location of GFDL Tracker executables
+GFDL_TRACKER_EXEC = /usr/local/bin

.github/parm/use_case_groups.json

@@ -1,7 +1,7 @@
 [
   {
     "category": "met_tool_wrapper",
-    "index_list": "0-54",
+    "index_list": "0-55",
     "new": false
   },
   {

ci/docker/docker_env/Dockerfile.gfdl-tracker

@@ -0,0 +1,35 @@
+FROM dtcenter/met:10.0.0
+
+# Needed to install GFDL Tracker
+ENV LIB_Z_PATH /usr/lib64
+ENV LIB_JASPER_PATH /usr/lib64
+ENV LIB_PNG_PATH /usr/lib64
+
+# Needed to install NetCDF-Fortran
+ENV NCDIR /usr/local
+
+# Install NetCDF-C 4.8.0
+RUN cd / \
+ && curl https://codeload.github.com/Unidata/netcdf-c/tar.gz/refs/tags/v4.8.0 --output v4.8.0.tar.gz \
+ && tar zxf v4.8.0.tar.gz \
+ && cd netcdf-c-4.8.0 \
+ && ./configure --disable-dap \
+ && make check install
+
+# Install NetCDF-Fortran 4.5.3
+RUN cd / \
+ && wget https://github.com/Unidata/netcdf-fortran/archive/refs/tags/v4.5.3.tar.gz \
+ && tar zxf v4.5.3.tar.gz \
+ && cd netcdf-fortran-4.5.3 \
+ && ./configure \
+ && make check install
+
+RUN cd / \
+ && wget https://dtcenter.ucar.edu/dfiles/code/METplus/gfdl_patch/standalone_gfdl-vortextracker_v3.9a_gcc.tar.gz \
+ && tar zxf standalone_gfdl-vortextracker_v3.9a_gcc.tar.gz \
+ && cd standalone_gfdl-vortextracker_v3.9a_gcc \
+ && unset FC && unset CC \
+ && ./configure \
+ && mv configure.trk-docker-gnu configure.trk \
+ && ./compile 2>&1 | tee tracker.log
+

ci/docker/docker_env/README.md

@@ -196,6 +196,23 @@ GempakToCF.jar file that is required to run use cases that read GEMPAK data. If
 this environment locally, Java should be available on the system you are running and the
 JAR file should be downloaded from the DTC website.
 
+## gfdl-tracker (using Dockerfile.gfdl-tracker)
+
+### Docker
+
+```
+docker build -t dtcenter/metplus-envs:gfdl-tracker -f ./Dockerfile.gfdl-tracker .
+docker push dtcenter/metplus-envs:gfdl-tracker
+```
+
+### Local
+
+This environment is not a conda environment. The Dockerfile installs the GFDL
+Tracker and specific versions of the NetCDF-C and NetCDF-Fortran libraries
+needed to install the tools. It is not recommended to follow these instructions
+to install the GFDL Tracker using these steps. Please consult the documentation
+for the tool for installation instructions.
+
 
 ## pytest (from metplus_base)