Drop PYTHONPATH from yet more easyconfigs

easybuilders · Sep 20, 2024 · 8ffbb06 · 8ffbb06
1 parent 2d1c32d
commit 8ffbb06
Show file tree

Hide file tree

Showing 22 changed files with 1 addition and 54 deletions.
diff --git a/easybuild/easyconfigs/a/Arrow/Arrow-16.1.0-gfbf-2023b.eb b/easybuild/easyconfigs/a/Arrow/Arrow-16.1.0-gfbf-2023b.eb
@@ -66,8 +66,6 @@ exts_list = [
  }),
 ]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 sanity_check_paths = {
  'files': ['lib/libarrow.a', 'lib/libarrow.%s' % SHLIB_EXT,
  'lib/python%%(pyshortver)s/site-packages/pyarrow/libarrow_python.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/b/bitsandbytes/bitsandbytes-0.43.3-foss-2023a-CUDA-12.1.1.eb b/easybuild/easyconfigs/b/bitsandbytes/bitsandbytes-0.43.3-foss-2023a-CUDA-12.1.1.eb
@@ -42,8 +42,4 @@ sanity_check_commands = [
  "python -c 'import bitsandbytes'",
 ]
 
-modextrapaths = {
- 'PYTHONPATH': ['lib/python%(pyshortver)s/site-packages']
-}
-
 moduleclass = 'ai'
diff --git a/easybuild/easyconfigs/b/bitsandbytes/bitsandbytes-0.43.3-foss-2023a.eb b/easybuild/easyconfigs/b/bitsandbytes/bitsandbytes-0.43.3-foss-2023a.eb
@@ -39,8 +39,4 @@ sanity_check_commands = [
  "python -c 'import bitsandbytes'",
 ]
 
-modextrapaths = {
- 'PYTHONPATH': ['lib/python%(pyshortver)s/site-packages']
-}
-
 moduleclass = 'ai'
diff --git a/easybuild/easyconfigs/e/ESPResSo/ESPResSo-4.2.2-foss-2023b.eb b/easybuild/easyconfigs/e/ESPResSo/ESPResSo-4.2.2-foss-2023b.eb
@@ -32,8 +32,6 @@ configopts += ' -DPYTHON_EXECUTABLE=$EBROOTPYTHON/bin/python '
 
 runtest = 'check_unit_tests && make check_python'
 
-modextrapaths = {'PYTHONPATH': ['lib/python%(pyshortver)s/site-packages']}
-
 _binaries = ['ipypresso', 'pypresso']
 _libs = [
  'Espresso_config', 'Espresso_core', 'Espresso_script_interface', 'Espresso_shapes',

diff --git a/easybuild/easyconfigs/f/fastfilters/fastfilters-0.3-foss-2023a.eb b/easybuild/easyconfigs/f/fastfilters/fastfilters-0.3-foss-2023a.eb
@@ -41,6 +41,4 @@ sanity_check_paths = {
 
 sanity_check_commands = ["python -c 'import fastfilters'"]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'lib'
diff --git a/easybuild/easyconfigs/g/GROMACS/GROMACS-2023.3-foss-2023a-PLUMED-2.9.0.eb b/easybuild/easyconfigs/g/GROMACS/GROMACS-2023.3-foss-2023a-PLUMED-2.9.0.eb
@@ -89,8 +89,4 @@ exts_list = [
  }),
 ]
 
-modextrapaths = {
- 'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/g/Gubbins/Gubbins-3.3.5-foss-2022b.eb b/easybuild/easyconfigs/g/Gubbins/Gubbins-3.3.5-foss-2022b.eb
@@ -48,8 +48,6 @@ postinstallcmds = [
  "cd python && python -m pip install --prefix %(installdir)s --no-build-isolation . "
 ]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 sanity_check_paths = {
  'files': ['bin/gubbins', 'lib/libgubbins.%s' % SHLIB_EXT],
  'dirs': [],

diff --git a/easybuild/easyconfigs/g/graph-tool/graph-tool-2.59-foss-2023a.eb b/easybuild/easyconfigs/g/graph-tool/graph-tool-2.59-foss-2023a.eb
@@ -57,6 +57,4 @@ sanity_check_commands = [
  "python -c 'import graph_tool.inference'",
 ]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'math'
diff --git a/easybuild/easyconfigs/h/HERRO/HERRO-0.1.0_20240808-foss-2023a.eb b/easybuild/easyconfigs/h/HERRO/HERRO-0.1.0_20240808-foss-2023a.eb
@@ -94,8 +94,6 @@ sanity_check_paths = {
 
 sanity_check_commands = ["herro --help"]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 modloadmsg = """
 To run scripts from /scripts directory just run <script_name>.sh
 Do not run it as scripts/<script_name>.sh

diff --git a/easybuild/easyconfigs/l/longread_umi/longread_umi-0.3.2-foss-2023a.eb b/easybuild/easyconfigs/l/longread_umi/longread_umi-0.3.2-foss-2023a.eb
@@ -72,8 +72,4 @@ sanity_check_commands = [
  'source %(installdir)s/scripts/dependencies.sh && longread_umi_version_dump',
 ]
 
-modextrapaths = {
- 'PYTHONPATH': ['lib/python%(pyshortver)s/site-packages']
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/n/NextPolish/NextPolish-1.4.1-GCCcore-12.3.0.eb b/easybuild/easyconfigs/n/NextPolish/NextPolish-1.4.1-GCCcore-12.3.0.eb
@@ -62,7 +62,6 @@ sanity_check_paths = {
 sanity_check_commands = ['nextPolish --help']
 
 modextrapaths = {
- 'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
  'PATH': '',
 }
 

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0-GCCcore-11.3.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0-GCCcore-11.3.0.eb
@@ -42,8 +42,6 @@ dependencies = [
 local_pyshortver = '3.10'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0.2-GCCcore-11.2.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0.2-GCCcore-11.2.0.eb
@@ -42,8 +42,6 @@ dependencies = [
 local_pyshortver = '3.9'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0.2-GCCcore-11.3.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0.2-GCCcore-11.3.0.eb
@@ -42,8 +42,6 @@ dependencies = [
 local_pyshortver = '3.10'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-12.2.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-12.2.0.eb
@@ -42,8 +42,6 @@ dependencies = [
 local_pyshortver = '3.10'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-12.3.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-12.3.0.eb
@@ -43,8 +43,6 @@ dependencies = [
 local_pyshortver = '3.11'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-13.2.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-13.2.0.eb
@@ -43,8 +43,6 @@ dependencies = [
 local_pyshortver = '3.11'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-13.3.0.eb b/easybuild/easyconfigs/o/OTF2/OTF2-3.0.3-GCCcore-13.3.0.eb
@@ -1,4 +1,4 @@
-# #
+#
 # This is an easyconfig file for EasyBuild, see https://github.com/easybuilders/easybuild
 # Copyright:: Copyright 2013-2024 Juelich Supercomputing Centre, Germany
 # Authors:: Bernd Mohr <b.mohr@fz-juelich.de>
@@ -47,8 +47,6 @@ dependencies = [
 local_pyshortver = '3.12'
 configopts = '--enable-shared'
 
-modextrapaths = {'PYTHONPATH': ['lib64/python%s/site-packages' % local_pyshortver]}
-
 sanity_check_paths = {
  'files': ['bin/otf2-config', 'include/otf2/otf2.h',
  'lib/libotf2.a', 'lib/libotf2.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/p/ParaView/ParaView-5.12.0-foss-2023b-Qt5.eb b/easybuild/easyconfigs/p/ParaView/ParaView-5.12.0-foss-2023b-Qt5.eb
@@ -67,6 +67,4 @@ sanity_check_paths = {
 
 sanity_check_commands = ['python -c "import paraview"']
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'vis'
diff --git a/easybuild/easyconfigs/p/pod5-file-format/pod5-file-format-0.3.10-foss-2023a.eb b/easybuild/easyconfigs/p/pod5-file-format/pod5-file-format-0.3.10-foss-2023a.eb
@@ -102,6 +102,4 @@ sanity_check_commands = [
  "python -c 'import lib_pod5'",
 ]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/s/SentencePiece/SentencePiece-0.2.0-GCC-13.2.0.eb b/easybuild/easyconfigs/s/SentencePiece/SentencePiece-0.2.0-GCC-13.2.0.eb
@@ -60,8 +60,4 @@ sanity_check_commands = [
  "python -c 'import sentencepiece'",
 ]
 
-modextrapaths = {
- 'PYTHONPATH': ['lib/python%(pyshortver)s/site-packages']
-}
-
 moduleclass = 'lib'
diff --git a/easybuild/easyconfigs/v/VTK/VTK-9.2.6-foss-2023a.eb b/easybuild/easyconfigs/v/VTK/VTK-9.2.6-foss-2023a.eb
@@ -73,8 +73,6 @@ postinstallcmds = [
  'sed "s/#VTK_VERSION#/%%(version)s/" %s > %s' % (local_egg_info_src, local_egg_info_dest),
 ]
 
-modextrapaths = {'PYTHONPATH': ['lib/python%(pyshortver)s/site-packages']}
-
 local_vtk_exec = ['vtk%s-%%(version_major_minor)s' % x
  for x in ['WrapJava', 'ParseJava', 'WrapPythonInit', 'WrapPython', 'WrapHierarchy']]
 local_vtk_exec += ['vtkpython']