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{bio}[foss/2023a] scVelo v0.3.1, loompy v3.0.7 #20002

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pavelToman
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(created using eb --new-pr)

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@boegelbot please test @ generoso

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@pavelToman: Request for testing this PR well received on login1

PR test command 'EB_PR=20002 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20002 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 12992

Test results coming soon (I hope)...

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Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/e95bd843fd2231b4fc0f941543c2cf61 for a full test report.

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@boegelbot please test @ jsc-zen3

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@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20002 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20002 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3698

Test results coming soon (I hope)...

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Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.3, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/c2e98415c7eddf25e86c0f0477c5b337 for a full test report.

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@pavelToman :

Found 2 variants of 'poetry' dependency in easyconfigs using '2023a' toolchain generation
* version: 1.5.1; versionsuffix:  as dep for {'gcsfs-2023.12.2.post1-foss-2023a.eb'}
  * version: 1.7.1; versionsuffix:  as dep for {'scVelo-0.3.1-foss-2023a.eb', 'loompy-3.0.7-foss-2023a.eb'}

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@boegelbot please test @ generoso

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@pavelToman: Request for testing this PR well received on login1

PR test command 'EB_PR=20002 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20002 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 13002

Test results coming soon (I hope)...

- notification for comment with ID 1972877546 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns2 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/7f92be96a384b49a1bd11089ffbb238e for a full test report.

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@boegelbot please test @ jsc-zen3

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@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20002 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20002 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3702

Test results coming soon (I hope)...

- notification for comment with ID 1972908469 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.3, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/477dfe8eb379e5b01adde63ce20f5917 for a full test report.

@boegel boegel added the update label Mar 5, 2024
@boegel boegel added this to the 4.x milestone Mar 14, 2024
get rid of hardcoded commit number for source

Co-authored-by: Kenneth Hoste <kenneth.hoste@ugent.be>
@pavelToman
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@boegelbot please test @ generoso

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@pavelToman: Request for testing this PR well received on login1

PR test command 'EB_PR=20002 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20002 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 13109

Test results coming soon (I hope)...

- notification for comment with ID 1997952744 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
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Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/592e9fa61b3c00baaa88ed495c1c9726 for a full test report.

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lgtm

@boegel boegel dismissed jfgrimm’s stale review March 14, 2024 19:52

poetry conflict fixed

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boegel commented Mar 15, 2024

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3118.skitty.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/boegel/8af656b591ca46fbfae73a02ba237bdf for a full test report.

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boegel commented Mar 15, 2024

Going in, thanks @pavelToman!

@boegel boegel merged commit ada466f into easybuilders:develop Mar 15, 2024
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@boegel boegel modified the milestones: 4.x, release after 4.9.0 Mar 15, 2024
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5 participants