Add flexiguide alignment parameters #107
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Seems reasonable to me! New args are passed, and their values are used in the alignment. Seems good! |
trevormartinj7
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Sep 27, 2024
Colelyman
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Oct 2, 2024
* Add flexiguid gap open and gap extend customized arguments * Implement new flexiguide gap extend and gap open parameters * Point to new test branch for integration tests * Bump version of setup-miniconda for pytest * Have flexiguide default penalties match the Needleman Wunsch defaults * Point test branch back to master
mbowcut2
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Oct 14, 2024
* Add flexiguid gap open and gap extend customized arguments * Implement new flexiguide gap extend and gap open parameters * Point to new test branch for integration tests * Bump version of setup-miniconda for pytest * Have flexiguide default penalties match the Needleman Wunsch defaults * Point test branch back to master
mbowcut2
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Nov 8, 2024
* Add flexiguid gap open and gap extend customized arguments * Implement new flexiguide gap extend and gap open parameters * Point to new test branch for integration tests * Bump version of setup-miniconda for pytest * Have flexiguide default penalties match the Needleman Wunsch defaults * Point test branch back to master
mbowcut2
pushed a commit
that referenced
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Nov 8, 2024
* Add flexiguid gap open and gap extend customized arguments * Implement new flexiguide gap extend and gap open parameters * Point to new test branch for integration tests * Bump version of setup-miniconda for pytest * Have flexiguide default penalties match the Needleman Wunsch defaults * Point test branch back to master
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This PR adds parameters that allow the user to customize the alignment parameters to be customized for flexiguide alignment.