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The Transcriptomic Age Prediction Tool has been described in: Peters MJ, Joehanes R, Pilling LC, Conneely K, Powell J et al. The transcriptional landscape of age in human peripheral blood. Nature Communications. 2015 Oct 22;6:8570. DOI: 10.1038/ncomms9570 TRAP Overview ============= Trap presents the user a web interface to configure an analysis. A grid scheduler checks for this configuration and runs it in sequence and results are copied to user directory and made available via the web interface. Trap uses: httpd - to present dashboard via web interface mysqldb/mariadb - to store user information and job meta data Sun Gridengine - to batch run analyses R - to run actual analyses Trap is programmed in SQL / R / HTML and PHP The folder provide: backend - the R scripts, transcriptome data and analysis invokation shell scripts sql - database layouts for users, jobs for the web frontend www - PHP web application code - web frontend In order to manually run: check the comments in the R scripts inside the backend directory (SCALED-PREDICTOR-XXXX.R)
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