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Update README.md
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@engrodawood
engrodawood authored Apr 11, 2023
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Expand Up @@ -22,7 +22,7 @@ Workspace directory contain necessary script for constructing graph and training

Step1: Download TCGA BRCA Diagnostic slides from <a href='https://docs.gdc.cancer.gov/Data_Portal/Users_Guide/Repository/'>GCD data portal</a>

Step2: Download tissue segmentation mask from this <a href = https://drive.google.com/file/d/1nvGyMm33gl-iYlVEziM_RjpL1c61ApXv/view?usp=sharing> Link</a>.
Step2: Download tissue segmentation mask from this <a href = "https://drive.google.com/file/d/1nvGyMm33gl-iYlVEziM_RjpL1c61ApXv/view?usp=sharing"> Link</a>.

Step3: Generate patches of each Whole slide image by running
```python patches_extraction.py```
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