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CDX import: Aromatized structures are not recognized when Pasting from Clipboard #950

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Zhirnoff opened this issue Dec 23, 2022 · 1 comment
Closed

CDX import: Aromatized structures are not recognized when Pasting from Clipboard #950

Zhirnoff opened this issue Dec 23, 2022 · 1 comment
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@even1024
Labels
Bug rc2
Milestone
indigo-1.9.0

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@Zhirnoff
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Zhirnoff commented Dec 23, 2022 •
edited
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Steps to Reproduce

  1. Launch Ketcher
  2. Paste into Clipboard
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Expected behavior
The structure is inserted without errors and looks the same as it was drawn
2022-12-23_14h26_49

Actual behavior
Aromatized structures are not recognized when Pasting from Clipboard. Error Message:
Convert error! struct data not recognized as molecule, query, reaction or reaction query

Attachments
2022-12-23_13h59_49
2022-12-23_14h02_08

Indigo/Bingo version
Indigo Toolkit
Version 1.9.0-rc.1.0-g9dd0dfc98-x86_64-linux-gnu-11.2.1
@Zhirnoff Zhirnoff added the Bug label Dec 23, 2022
@Zhirnoff Zhirnoff added this to the Indigo-1.10.0 milestone Dec 23, 2022
@Zhirnoff Zhirnoff modified the milestones: Indigo-1.10.0, indigo-1.9.0 Dec 23, 2022
@Zhirnoff Zhirnoff added the rc2 label Dec 23, 2022
@even1024
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fixed in pr #953

even1024 added a commit that referenced this issue Dec 26, 2022
@even1024
CDX import: Aromatized structures are not recognized when Pasting fro…
3f0e094 
…m Clipboard #950 (#953)

* bond order fix

* clang fix

* test fix

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>
even1024 added a commit that referenced this issue Dec 26, 2022
@even1024
Backmerge: Bugfix/950 cdx aromatized structures (#954)
210fc83 
* rgroups (#946)

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>

* CDX import: Reaction arrows disappear when opening a file #943 (#948)

* marvin cdx fix

* clang fix

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>

* CDX import: Aromatized structures are not recognized when Pasting from Clipboard #950 (#953)

* bond order fix

* clang fix

* test fix

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>
loimu pushed a commit that referenced this issue Jan 17, 2023
@even1024
Backmerge: Bugfix/950 cdx aromatized structures (#954)
a15417c 
* rgroups (#946)

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>

* CDX import: Reaction arrows disappear when opening a file #943 (#948)

* marvin cdx fix

* clang fix

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>

* CDX import: Aromatized structures are not recognized when Pasting from Clipboard #950 (#953)

* bond order fix

* clang fix

* test fix

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>

Co-authored-by: Roman Porozhnetov <roman_porozhnetov@epam.com>
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