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HELM inline SMILES monomer canvas color is wrong #5466

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AlexeyGirin opened this issue Sep 9, 2024 · 2 comments · Fixed by #5471 or #5486
Closed

HELM inline SMILES monomer canvas color is wrong #5466

AlexeyGirin opened this issue Sep 9, 2024 · 2 comments · Fixed by #5471 or #5486
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@rrodionov91
Labels
bug HELM Bucket: Bugs related to Export to HELM format Priority: Low
Milestone
Ketcher 2.25.0-rc.2

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@AlexeyGirin
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AlexeyGirin commented Sep 9, 2024 •
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Steps to Reproduce

  1. Toggle to Macro - Flex mode
  2. Load HELM from paste from clipboard way: RNA1{R([C1(C2=C(N=CN=1)N%91C=N2)N.[*:1]%91 |$;;;;;;;;;;_R1$|])P}$$$$V2.0

Actual behavior
System shows loaded base as base with A natural analog
image

Expected behavior
System shows loaded base as base with unknown (X) natural analog
image

Versions

  • Ketcher Version 2.25.0-rc.1 Build at 2024-09-03; 15:31:03
  • Indigo Toolkit Version 1.24.0-rc.1.0-gb8f099851-wasm32-wasm-clang-19.0.0
  • Chrome Version 128.0.6613.114 (Official Build) (64-bit)
  • Win10

Reference issues: epam/Indigo#2189
@AlexeyGirin AlexeyGirin added bug Priority: Low HELM Bucket: Bugs related to Export to HELM format labels Sep 9, 2024
@AliaksandrDziarkach
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This is ketcher issue.
Indigo return no natural analog for such monomers:
image

@AlexeyGirin AlexeyGirin transferred this issue from epam/Indigo Sep 10, 2024
@AlexeyGirin AlexeyGirin added this to the Ketcher 2.25.0-rc.2 milestone Sep 10, 2024
@rrodionov91 rrodionov91 self-assigned this Sep 10, 2024
rrodionov91 added a commit that referenced this issue Sep 10, 2024
@rrodionov91
#5466 - HELM inline SMILES monomer canvas color is wrong
7ab7527
@rrodionov91 rrodionov91 linked a pull request Sep 10, 2024 that will close this issue
#5466 - HELM inline SMILES monomer canvas color is wrong #5471
Merged
9 tasks
rrodionov91 added a commit that referenced this issue Sep 10, 2024
@rrodionov91
#5466 - HELM inline SMILES monomer canvas color is wrong (#5471)
13fbe40
rrodionov91 added a commit that referenced this issue Sep 11, 2024
@rrodionov91
#5466 - HELM inline SMILES monomer canvas color is wrong
fae6792
@rrodionov91 rrodionov91 linked a pull request Sep 11, 2024 that will close this issue
Backmerge: #5466 - HELM inline SMILES monomer canvas color is wrong #5486
Merged
9 tasks
rrodionov91 added a commit that referenced this issue Sep 11, 2024
@rrodionov91
#5466 - HELM inline SMILES monomer canvas color is wrong (#5486)
82a7d00
@AlexeyGirin
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Verified.
image
Versions

  • Ketcher Version 2.25.0-rc.2 Build at 2024-09-14; 10:47:47
  • Indigo Toolkit Version 1.24.0-rc.2.0-g5f2751d70-wasm32-wasm-clang-19.0.0
  • Chrome Version 128.0.6613.138 (Official Build) (64-bit)
  • Win10

Guch1g0v pushed a commit that referenced this issue Oct 17, 2024
@rrodionov91 @Guch1g0v
#5466 - HELM inline SMILES monomer canvas color is wrong (#5486)
248d740
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@rrodionov91 rrodionov91

Labels
bug HELM Bucket: Bugs related to Export to HELM format Priority: Low
Projects
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Milestone
Ketcher 2.25.0-rc.2
3 participants
@rrodionov91 @AliaksandrDziarkach @AlexeyGirin