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Update CITATION.cff
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GeraldineGomez committed Dec 4, 2024
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Expand Up @@ -7,10 +7,16 @@ cff-version: 1.2.0
message: 'To cite package "sivirep" in publications use:'
type: software
license: MIT
title: 'sivirep: Data Wrangling and Automated Reports from ''SIVIGILA'' source'
version: 1.0.0
abstract: Provides functions for data wrangling and automated reports from 'SIVIGILA'
source.
title: 'sivirep: Data Wrangling and Automated Reports from ''SIVIGILA'' Source'
version: 1.0.1
doi: 10.32614/CRAN.package.sivirep
abstract: Data wrangling, pre-processing, and generating automated reports from Colombia's
epidemiological surveillance system, 'SIVIGILA' <https://portalsivigila.ins.gov.co/>.
It provides a customizable R Markdown template for analysis and automatic generation
of epidemiological reports that can be adapted to local, regional, and national
contexts. This tool offers a standardized and reproducible workflow that helps to
reduce manual labor and potential errors in report generation, improving their efficiency
and consistency.
authors:
- family-names: Gómez-Millán
given-names: Geraldine
Expand All @@ -28,13 +34,14 @@ authors:
given-names: Claudia
email: chuguett@hotmail.com
orcid: https://orcid.org/0000-0002-9814-2386
repository: https://CRAN.R-project.org/package=sivirep
repository-code: https://github.com/epiverse-trace/sivirep
url: https://epiverse-trace.github.io/sivirep/
contact:
- family-names: Cucunubá
given-names: Zulma M.
email: zulma.cucunuba@javeriana.edu.co
orcid: https://orcid.org/0000-0002-8165-3198
- family-names: Gómez-Millán
given-names: Geraldine
email: geralidine.gomez@javeriana.edu.co
orcid: https://orcid.org/0009-0007-8701-0568
keywords:
- colombia
- epidemiological-surveillance
Expand All @@ -54,6 +61,7 @@ references:
given-names: JJ
email: jj@rstudio.com
year: '2024'
doi: 10.32614/CRAN.package.config
- type: software
title: dplyr
abstract: 'dplyr: A Grammar of Data Manipulation'
Expand All @@ -78,6 +86,7 @@ references:
email: davis@posit.co
orcid: https://orcid.org/0000-0003-4777-038X
year: '2024'
doi: 10.32614/CRAN.package.dplyr
- type: software
title: ggplot2
abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
Expand Down Expand Up @@ -117,6 +126,7 @@ references:
name-particle: van den
orcid: https://orcid.org/0000-0002-9335-7468
year: '2024'
doi: 10.32614/CRAN.package.ggplot2
- type: software
title: httr2
abstract: 'httr2: Perform HTTP Requests and Process the Responses'
Expand All @@ -126,8 +136,9 @@ references:
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@rstudio.com
email: hadley@posit.co
year: '2024'
doi: 10.32614/CRAN.package.httr2
- type: software
title: stringr
abstract: 'stringr: Simple, Consistent Wrappers for Common String Operations'
Expand All @@ -139,6 +150,7 @@ references:
given-names: Hadley
email: hadley@posit.co
year: '2024'
doi: 10.32614/CRAN.package.stringr
- type: software
title: xml2
abstract: 'xml2: Parse XML'
Expand All @@ -154,6 +166,7 @@ references:
- family-names: Ooms
given-names: Jeroen
year: '2024'
doi: 10.32614/CRAN.package.xml2
- type: software
title: epitrix
abstract: 'epitrix: Small Helpers and Tricks for Epidemics Analysis'
Expand All @@ -171,6 +184,7 @@ references:
given-names: Flavio
email: flavio.finger@lshtm.ac.uk
year: '2024'
doi: 10.32614/CRAN.package.epitrix
- type: software
title: sf
abstract: 'sf: Simple Features for R'
Expand All @@ -183,6 +197,7 @@ references:
email: edzer.pebesma@uni-muenster.de
orcid: https://orcid.org/0000-0001-8049-7069
year: '2024'
doi: 10.32614/CRAN.package.sf
- type: software
title: readxl
abstract: 'readxl: Read Excel Files'
Expand All @@ -199,6 +214,32 @@ references:
email: jenny@posit.co
orcid: https://orcid.org/0000-0002-6983-2759
year: '2024'
doi: 10.32614/CRAN.package.readxl
- type: software
title: rlang
abstract: 'rlang: Functions for Base Types and Core R and ''Tidyverse'' Features'
notes: Imports
url: https://rlang.r-lib.org
repository: https://CRAN.R-project.org/package=rlang
authors:
- family-names: Henry
given-names: Lionel
email: lionel@posit.co
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
year: '2024'
doi: 10.32614/CRAN.package.rlang
- type: software
title: tools
abstract: 'R: A Language and Environment for Statistical Computing'
notes: Imports
authors:
- name: R Core Team
institution:
name: R Foundation for Statistical Computing
address: Vienna, Austria
year: '2024'
- type: software
title: sysfonts
abstract: 'sysfonts: Loading Fonts into R'
Expand All @@ -211,6 +252,7 @@ references:
- family-names: details.
given-names: authors/contributors of the included fonts. See file AUTHORS for
year: '2024'
doi: 10.32614/CRAN.package.sysfonts
- type: software
title: showtext
abstract: 'showtext: Using Fonts More Easily in R Graphs'
Expand All @@ -223,6 +265,7 @@ references:
- family-names: details.
given-names: authors/contributors of the included software. See file AUTHORS for
year: '2024'
doi: 10.32614/CRAN.package.showtext
- type: software
title: kableExtra
abstract: 'kableExtra: Construct Complex Table with ''kable'' and Pipe Syntax'
Expand All @@ -235,6 +278,7 @@ references:
email: haozhu233@gmail.com
orcid: https://orcid.org/0000-0002-3386-6076
year: '2024'
doi: 10.32614/CRAN.package.kableExtra
- type: software
title: knitr
abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
Expand All @@ -247,6 +291,7 @@ references:
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
year: '2024'
doi: 10.32614/CRAN.package.knitr
- type: software
title: rmarkdown
abstract: 'rmarkdown: Dynamic Documents for R'
Expand Down Expand Up @@ -290,6 +335,23 @@ references:
email: rich@posit.co
orcid: https://orcid.org/0000-0003-3925-190X
year: '2024'
doi: 10.32614/CRAN.package.rmarkdown
- type: software
title: spelling
abstract: 'spelling: Tools for Spell Checking in R'
notes: Suggests
url: https://ropensci.r-universe.dev/spelling
repository: https://CRAN.R-project.org/package=spelling
authors:
- family-names: Ooms
given-names: Jeroen
email: jeroenooms@gmail.com
orcid: https://orcid.org/0000-0002-4035-0289
- family-names: Hester
given-names: Jim
email: james.hester@rstudio.com
year: '2024'
doi: 10.32614/CRAN.package.spelling
- type: software
title: testthat
abstract: 'testthat: Unit Testing for R'
Expand All @@ -301,6 +363,7 @@ references:
given-names: Hadley
email: hadley@posit.co
year: '2024'
doi: 10.32614/CRAN.package.testthat
version: '>= 3.0.0'
- type: software
title: 'R: A Language and Environment for Statistical Computing'
Expand All @@ -312,5 +375,5 @@ references:
name: R Foundation for Statistical Computing
address: Vienna, Austria
year: '2024'
version: '>= 3.5.0'
version: '>= 4.0.0'

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