v. 1.3.4
Changes:
- Add argument
clusterLabels
toplotClusters
to allow user to set clusterLabels without changing the object. - Added data object of run of RSEC. Changed
lazyLoad
tofalse
because loading this object on installation was creating errors. - Updated vignette to more completely cover RSEC.
- Change default
clusterFunction
argument toRSEC
to be "hierarchical01" rather than all 01 methods (previous default). This reduces load of making simple call. - Updated validity checks to reduce memory load, and dropped
validObject
calls. - Added function
getClusterManyParams
to parse the parameter values in the clusterLabels from clusterMany - Removed old dependency on diagram (from previous vignette, no longer needed)
Bugs:
- Fixed error in subsetting of clusterExperiment object when dendrogram is attached (previously didn't reset dendro_outbranch to NA)