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active matter tutorial to notebook (#4304)
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Fixes #4183 

Description of changes:
- move the active matter tutorial scripts to a single notebook
- add exercise blocks
- rework text
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kodiakhq[bot] authored Jul 20, 2021
2 parents 5dd1703 + d8d4c10 commit d428653
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Showing 23 changed files with 1,030 additions and 6,406 deletions.
24 changes: 3 additions & 21 deletions doc/tutorials/active_matter/CMakeLists.txt
Original file line number Diff line number Diff line change
@@ -1,23 +1,5 @@
configure_tutorial_target(
TARGET
tutorial_am
DEPENDS
active_matter.ipynb
figures/friction.svg
figures/pusher-puller.svg
figures/enhanced.svg
figures/geometry.svg
figures/rectify.jpg
figures/rectification.svg
figures/flow_field.svg
exercises/enhanced_diffusion.py
exercises/flow_field.py
exercises/rectification_geometry.py
exercises/rectification_simulation.py
solutions/enhanced_diffusion.py
solutions/flow_field.py
solutions/rectification_geometry.py
solutions/rectification_simulation.py
solutions/solutions.txt)
TARGET tutorial_am DEPENDS active_matter.ipynb figures/friction.svg
figures/pusher-puller.svg figures/geometry.svg figures/flow_field.svg)

nb_export(TARGET tutorial_am SUFFIX "" FILE "active_matter.ipynb" HTML_RUN)
nb_export(TARGET tutorial_am FILE "active_matter.ipynb" HTML_RUN)
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