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Remove LaTeX dependency #3395

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merged 7 commits into from
Jan 3, 2020
Merged

Remove LaTeX dependency #3395

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9fd0684
Cleanup bibliography
jngrad Dec 27, 2019
961ba8e
Convert LaTeX tutorial to Jupyter
jngrad Dec 27, 2019
24c05be
Remove LaTeX-related files
jngrad Dec 27, 2019
ea38c9b
Update tutorial
jngrad Dec 27, 2019
8fe8bab
Style
jngrad Jan 2, 2020
5d8bc7f
Fix Jupyter issue with teletype HTML tags
jngrad Jan 2, 2020
332c70a
Merge branch 'python' into fix-3249
kodiakhq[bot] Jan 3, 2020
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12 changes: 0 additions & 12 deletions doc/CMakeLists.txt
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Expand Up @@ -3,16 +3,4 @@ add_subdirectory(sphinx)
add_subdirectory(logo)
add_subdirectory(tutorials)

find_program(PDFLATEX pdflatex)
find_program(BIBTEX bibtex)
find_program(MAKEINDEX makeindex)

set(abs_srcdir ${CMAKE_CURRENT_SOURCE_DIR})
set(abs_top_srcdir ${CMAKE_SOURCE_DIR})

configure_file(latexit.sh.in
${CMAKE_BINARY_DIR}/doc/latexit.sh
@ONLY
)

add_custom_target(doc DEPENDS logo doxygen tutorials)
82 changes: 0 additions & 82 deletions doc/latexit.sh.in
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10 changes: 0 additions & 10 deletions doc/misc/bibliography.bib
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262 changes: 0 additions & 262 deletions doc/misc/python.tex
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4 changes: 3 additions & 1 deletion doc/sphinx/contributing.rst
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Expand Up @@ -86,7 +86,7 @@ Required Development Tools

- To build the user documentation, you will need Sphinx_.

- To build the tutorials, you will need LaTeX and Jupyter.
- To build the tutorials, you will need Jupyter_.

- To build the core documentation, you will need Doxygen_.

Expand Down Expand Up @@ -124,3 +124,5 @@ in :ref:`Installation` and then the documentation with ``make sphinx``.
.. _Doxygen: http://www.doxygen.org/

.. _Sphinx: https://www.sphinx-doc.org/en/master/

.. _Jupyter: https://jupyter.org/
2 changes: 1 addition & 1 deletion doc/tutorials/01-lennard_jones/01-lennard_jones.ipynb
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Expand Up @@ -377,7 +377,7 @@
"At this point, we have set the necessary environment and warmed up our system. Now, we integrate the equations of motion and take measurements. We first plot the radial distribution function which describes how the density varies as a function of distance from a tagged particle. The radial distribution function is averaged over several measurements to reduce noise.\n",
"\n",
"The potential and kinetic energies can be monitored using the analysis method <tt>system.analysis.energy()</tt>.\n",
"<tt>kinetic_temperature</tt> here refers to the measured temperature obtained from kinetic energy and the number\n",
"Here <tt>kinetic_temperature</tt> refers to the measured temperature obtained from kinetic energy and the number\n",
"of degrees of freedom in the system. It should fluctuate around the preset temperature of the thermostat.\n",
"\n",
"The mean square displacement of particle $i$ is given by:\n",
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