Remove numpy.asfarray usage to support v2.0 deprecation #934
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np.asfarray
was removed in Numpy-2.0.0 (release notes), in favor of usingnp.asarray
.np.asarray
is available in the existingnumpy>=1.24.2
versions currently specified by the cnvkit conda env. cnvkit otherwise functions properly withnumpy-2.*
andpython-3.12
after updating the usage of this method.