Merge branch 'NeuroJSON:master' into master #6
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| name: ZMat CI | |
| on: [push, pull_request] | |
| jobs: | |
| octave_test: | |
| name: Octave tests | |
| strategy: | |
| # tested octave versions: ubuntu-20.04 = 5.2, ubuntu-22.04 = 6.4, macos-11 = 8.1, windows-2019 = 8.3 | |
| matrix: | |
| os: [ubuntu-20.04, ubuntu-22.04, macos-11, windows-2019] | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: 'recursive' | |
| - name: Install dependencies | |
| run: | | |
| [[ "$RUNNER_OS" == "Linux" ]] && sudo apt-get update && sudo apt-get install -y liboctave-dev | |
| [[ "$RUNNER_OS" == "macOS" ]] && brew install octave | |
| if [[ "$RUNNER_OS" == "Windows" ]]; then | |
| curl --retry 3 -kL http://cdimage.debian.org/mirror/gnu.org/gnu/octave/windows/octave-8.3.0-w64-64.7z --output octave_8.3.0.7z | |
| 7z x octave_8.3.0.7z -ooctave -y | |
| echo 'C:\msys64\mingw64\bin' >> $GITHUB_PATH | |
| echo "$PWD/octave/octave-8.3.0-w64-64/mingw64/bin" >> $GITHUB_PATH | |
| fi | |
| - name: Install msys2 libraries (Windows only) | |
| if: ${{ runner.os == 'Windows' }} | |
| uses: msys2/setup-msys2@v2 | |
| with: | |
| update: true | |
| install: >- | |
| mingw-w64-x86_64-gcc | |
| mingw-w64-x86_64-zlib | |
| mingw-w64-x86_64-winpthreads-git | |
| base-devel | |
| - name: Build static library | |
| run: | | |
| which gcc | |
| which g++ | |
| make -C src lib CC=gcc CXX=g++ | |
| make -C example/c all CC=gcc CXX=g++ LIBTYPE= | |
| if [ "$RUNNER_OS" == "macOS" ]; then | |
| DYLD_LIBRARY_PATH=lib example/c/testzmat; | |
| else | |
| LD_LIBRARY_PATH=lib example/c/testzmat; | |
| fi | |
| octave-cli --eval "fprintf(1,['OCTAVE_ARCH=' regexprep(computer('arch'), 'darwin[0-9.]+-', 'darwin-')])" | |
| octave-cli --eval "fprintf(1,['OCTAVE_ARCH=' regexprep(computer('arch'), 'darwin[0-9.]+-', 'darwin-')])" >> $GITHUB_ENV | |
| - name: Build dynamic library | |
| run: | | |
| make -C src dll CC=gcc CXX=g++ | |
| make -C example/c all CC=gcc CXX=g++ LIBTYPE= | |
| if [ "$RUNNER_OS" == "macOS" ]; then | |
| DYLD_LIBRARY_PATH=lib example/c/testzmat; | |
| else | |
| LD_LIBRARY_PATH=lib example/c/testzmat; | |
| fi | |
| - name: Build octave mex (Windows only) | |
| if: ${{ runner.os == 'Windows' }} | |
| shell: msys2 {0} | |
| run: | | |
| export PATH="/mingw64/bin":"$PWD/octave/octave-8.3.0-w64-64/mingw64/bin":$PATH | |
| which gcc | |
| gcc -v | |
| make -C src oct CC=gcc CXX=g++ USERLINKOPT="-static-libgcc -static-libstdc++ -fstack-protector -L/mingw64/lib -Wl,-Bstatic -lz -lwinpthread -Wl,-Bdynamic -v -s '$PWD/octave/octave-8.3.0-w64-64/mingw64/lib/octave/8.3.0/liboctinterp.dll.a'" | |
| cp /mingw64/bin/zlib1.dll . | |
| objdump -p zipmat.mex | grep "DLL Name:" | |
| strip zipmat.mex | |
| echo "$PWD/octave/octave-8.3.0-w64-64/mingw64/bin" >> $GITHUB_PATH | |
| - name: Build octave mex (Linux and Mac) | |
| if: ${{ runner.os != 'Windows' }} | |
| run: | | |
| gcc -v | |
| if [ "$RUNNER_OS" == "macOS" ]; then | |
| make -C src oct CC=gcc CXX=g++ MEXLINKOPT="-static" USERLINKOPT="-v -s" | |
| otool -L zipmat.mex | |
| else | |
| make -C src oct CC=gcc CXX=g++ MEXLINKOPT="-static-libgcc -static-libstdc++ -Wl,-Bstatic -lm -lpthread -Wl,-Bdynamic" USERLINKOPT="-v -s" | |
| ldd zipmat.mex | |
| fi | |
| strip -S zipmat.mex | |
| - name: Run octave test | |
| run: | | |
| octave-cli --version | |
| if [ "$RUNNER_OS" == "Windows" ]; then | |
| export PATH="$PWD/octave/octave-8.3.0-w64-64/mingw64/bin":$PATH | |
| fi | |
| if [ "$RUNNER_OS" == "Linux" ]; then | |
| octave-cli --eval "addpath(pwd);cd test;run_zmat_test" | |
| elif [ "$RUNNER_OS" == "macOS" ]; then | |
| octave-cli --eval "addpath(pwd);cd test;run_zmat_test({'c','d'})" | |
| else | |
| octave-cli --eval "addpath(pwd);which zipmat;disp(char(zmat(zmat('test zlib'),0,'zlib')));disp(char(zmat(zmat('test gzip',1,'gzip'),0,'gzip')));disp(char(zmat(zmat('test lzma',1,'lzma'),0,'lzma')));disp(char(zmat(zmat('test blosc2lz4',1,'blosc2lz4'),0,'blosc2lz4')));" | |
| fi | |
| - name: Create package folder | |
| run: | | |
| mkdir packages | |
| mkdir zmat | |
| mkdir -p zmat/octave/${{ env.OCTAVE_ARCH }} | |
| cp *.{m,txt,rst} zmat/ | |
| cp PKG_ADD* zmat/ | |
| cp -a example zmat/ | |
| cp -a test zmat/ | |
| - name: Create release tag | |
| run: perl -e "print 'RELEASE_TAG='. lc('${{ runner.os }}-${{ runner.arch }}-github-latest')" >> $GITHUB_ENV | |
| - name: Zip zmat | |
| run: | | |
| mv zipmat.mex zmat/octave/${{ env.OCTAVE_ARCH }} | |
| if [[ "$RUNNER_OS" == "Windows" ]]; then | |
| cp /mingw64/bin/zlib1.dll zmat/octave/${{ env.OCTAVE_ARCH }} | |
| 7z a -tzip packages/zmat-octave-${{ env.RELEASE_TAG }}.zip zmat | |
| else | |
| zip -FSr --symlink packages/zmat-octave-${{ env.RELEASE_TAG }}.zip zmat | |
| fi | |
| - name: Upload zmat package | |
| if: ${{ matrix.os == 'ubuntu-20.04' || matrix.os == 'macos-11' || matrix.os == 'windows-2019' }} | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: all-zmat-packages | |
| path: packages/zmat-octave-${{ env.RELEASE_TAG }}.zip | |
| matlab_test: | |
| name: MATLAB test | |
| strategy: | |
| matrix: | |
| os: [ubuntu-20.04, macos-11, windows-2019] | |
| defaults: | |
| run: | |
| shell: bash | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: 'recursive' | |
| - name: Set up MATLAB | |
| uses: matlab-actions/setup-matlab@v1 | |
| - name: Install msys2 libraries (Windows only) | |
| if: ${{ runner.os == 'Windows' }} | |
| uses: msys2/setup-msys2@v2 | |
| with: | |
| update: true | |
| install: >- | |
| mingw-w64-x86_64-gcc | |
| mingw-w64-x86_64-zlib | |
| mingw-w64-x86_64-winpthreads-git | |
| base-devel | |
| - name: Set up mex gcc (Windows only) | |
| if: ${{ runner.os == 'Windows' }} | |
| run: | | |
| echo 'MW_MINGW64_LOC=/c/msys64/mingw64' >> $GITHUB_ENV | |
| echo 'COMPFLAGS=""' >> $GITHUB_ENV | |
| - name: Build MATLAB mex | |
| run: | | |
| rm -rf private | |
| if [[ "$RUNNER_OS" == "Windows" ]]; then | |
| make -C src mex CC=gcc CXX=g++ MEX="cmd //s //c mex -f mexopts_msys2_gcc.xml " USERLINKOPT="-v " CXXLIBS="-Lblosc2/lib -L/blosc2/internal-complibs/zstd-1.5.2" | |
| objdump -p zipmat.mexw* | grep "DLL Name:" | |
| elif [[ "$RUNNER_OS" == "macOS" ]]; then | |
| make -C src mex CC=gcc-10 CXX=g++10 MEXLINKOPT="-static-libstdc++" | |
| otool -L zipmat.mex* | |
| else | |
| make -C src mex CC=gcc CXX=g++ MEXLINKOPT="-static-libgcc -static-libstdc++ -Wl,-Bstatic -lz -Wl,-Bdynamic" MEX="mex -v" | |
| ldd zipmat.mex* | |
| fi | |
| strip -S zipmat.mex* | |
| - name: Run MATLAB examples | |
| uses: matlab-actions/run-command@v1 | |
| with: | |
| command: addpath(pwd);cd test;run_zmat_test | |
| - name: Create package folder | |
| run: | | |
| mkdir packages | |
| mkdir zmat | |
| mkdir -p zmat/private | |
| mkdir -p zmat/example | |
| cp *.{m,txt,rst} zmat/ | |
| cp -a example/*.m zmat/example | |
| cp -a test zmat/ | |
| - name: Create release tag | |
| run: perl -e "print 'RELEASE_TAG='. lc('${{ runner.os }}-${{ runner.arch }}-github-latest')" >> $GITHUB_ENV | |
| - name: Zip zmat | |
| run: | | |
| mv zipmat.mex* zmat/private | |
| if [[ "$RUNNER_OS" == "Windows" ]]; then | |
| 7z a -tzip packages/zmat-matlab-${{ env.RELEASE_TAG }}.zip zmat | |
| else | |
| zip -FSr --symlink packages/zmat-matlab-${{ env.RELEASE_TAG }}.zip zmat | |
| fi | |
| - name: Upload zmat package | |
| if: ${{ matrix.os == 'ubuntu-20.04' || matrix.os == 'macos-11' || matrix.os == 'windows-2019' }} | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: all-zmat-packages | |
| path: packages/zmat-matlab-${{ env.RELEASE_TAG }}.zip | |
| upload_package: | |
| name: Upload Packages | |
| needs: [octave_test, matlab_test] | |
| runs-on: ubuntu-20.04 | |
| if: ${{ github.repository_owner == 'NeuroJSON' && github.event_name != 'pull_request'}} | |
| steps: | |
| - name: Download zmat | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: all-zmat-packages | |
| path: packages | |
| - name: Create all-in-one zmat package | |
| run: | | |
| cd packages | |
| unzip -n 'zmat*.zip' | |
| tree . | |
| zip -FSr --symlink zmat-allinone-github-latest.zip zmat | |
| rm -rf zmat | |
| - name: Display structure of downloaded files | |
| run: ls -R packages | |
| - name: Copy package to server | |
| if: ${{ github.repository_owner == 'NeuroJSON' && github.event_name != 'pull_request'}} | |
| uses: wlixcc/SFTP-Deploy-Action@v1.2.4 | |
| with: | |
| server: ${{ secrets.MCX_SERVER }} | |
| username: ${{ secrets.MCX_SERVER_USER }} | |
| ssh_private_key: ${{ secrets.MCX_SERVER_SSH_KEY }} | |
| local_path: "packages/zmat-allinone-github-latest.zip" | |
| remote_path: ${{ secrets.MCX_CI_PATH }} |