do not install jellyfish by default: installing jellyfish by default …

…breaks bioconda compatibility
fbreitwieser · Jun 23, 2022 · 02efeca · 02efeca
1 parent af533f2
commit 02efeca
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/install_krakenuniq.sh b/install_krakenuniq.sh
@@ -39,7 +39,7 @@ On MacOS, if you experience the error \"clang: fatal error: unsupported option '
 "
 
 
-while getopts "Cshc:gl:" OPTION; do
+while getopts "Chjc:gl:" OPTION; do
     case $OPTION in
     c) MAKE_ARGS="CXX=\"$OPTARG\"" ;;
     C) MAKE_CLEAN="" ;;