first draft for ci pipeline with github action

.github/workflows/ci.yml

@@ -0,0 +1,34 @@
+name: Continuous integration
+
+on:
+  - pull_request
+  - push
+
+
+jobs:
+
+  test:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version:
+          - "3.12"
+    steps:
+      - uses: actions/checkout@v3
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v3
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install tox pylint black
+      # - name: Run Formatter
+      #   run: black --diff --check $(git ls-files '*.py')
+      - name: Run Linter
+        run: pylint --exit-zero $(git ls-files '*.py')
+      - name: Run tests with tox
+        run: tox -e py3
+      - name: Upload coverage report
+        if: ${{ matrix.python-version == 3.12 }} # Only upload coverage once
+        uses: codecov/codecov-action@v1

publications/2023-neurips/pytest.ini

@@ -0,0 +1,4 @@
+[pytest]
+norecursedirs = .git 
+filterwarnings =
+    ignore:The objective has been evaluated at this point before.:UserWarning

publications/2023-neurips/setup.cfg

@@ -20,10 +20,10 @@ classifiers =
     Development Status :: 3 - Alpha
     Programming Language :: Python
     Programming Language :: Python :: 3
-    Programming Language :: Python :: 3.7
-    Programming Language :: Python :: 3.8
     Programming Language :: Python :: 3.9
     Programming Language :: Python :: 3.10
+    Programming Language :: Python :: 3.11
+    Programming Language :: Python :: 3.12
 
 [options]
 packages = find:

publications/2023-neurips/tox.ini

@@ -0,0 +1,19 @@
+# content of: tox.ini , put in same dir as setup.py
+[tox]
+# python3 interpreter of the user.
+envlist = py3
+
+[testenv]
+# install pytest in the virtualenv where commands will be executed
+deps = pytest
+       coverage
+commands =
+    # NOTE: you can run any command line tool here - not just tests
+    coverage run --source=publications/2023-neurips/lcdb/ -m pytest test/
+    coverage html
+    coverage xml
+
+[flake8]
+max-line-length = 88
+select = C,E,F,W,B,B950
+extend-ignore = E203, E501, W503, W605, E741