forked from bigdatagenomics/adam
-
Notifications
You must be signed in to change notification settings - Fork 1
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
[ADAM-2059] Properly pass back primitive typed arrays to HTSJDK.
Resolves bigdatagenomics#2059.
- Loading branch information
Frank Austin Nothaft
committed
Oct 22, 2018
1 parent
4a0c35e
commit b9ef4e6
Showing
3 changed files
with
36 additions
and
13 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,5 @@ | ||
@SQ SN:1 LN:249250621 | ||
@SQ SN:2 LN:243199373 | ||
@PG ID:p1 PN:myProg CL:"myProg 123" VN:1.0.0 | ||
@PG ID:p2 PN:myProg CL:"myProg 456" VN:1.0.0 PP:p1 | ||
simread:1:26472783:false 16 1 26472784 60 75M * 0 0 GTATAAGAGCAGCCTTATTCCTATTTATAATCAGGGTGAAACACCTGTGCCAATGCCAAGACAGGGGTGCCAAGA * NM:i:0 AS:i:75 XS:i:0 Zb:B:c,-1,0,1 ZB:B:C,1,0,1 Zi:B:i,-1,0,1,2 ZI:B:I,1,0,1,2 Zs:B:s,-2,0,2 ZS:B:S,2,0,2 ZF:B:f,-1.100000,0.000000,1.100000 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters