Skip to content

MCscan software and command line-based BLAST available in a Jupyter environment running via the Binder service

License

Notifications You must be signed in to change notification settings

fomightez/mcscan-blast-binder

Repository files navigation

Binder

mcscan-blast-binder

Both MCscan software and command line-based BLAST available in a Jupyter environment running via the Binder service

Python 2-focused repo because it is meant to combine main software abilities of my mcscan-binder and blast-binder repos. For some workflows/pipelines it would be handy to have both running in same Jupyter session.
See those individual repos for the information on the software and how to use each.

Added nteract's Papermill, too, to allow triggering specific notebooks to run with externally defined parameters; it is Python 2 compatible and I have verified it works here.

Binder

About

MCscan software and command line-based BLAST available in a Jupyter environment running via the Binder service

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published