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fr-0zt/README.md

Hi there 👋, I'm Senal Liyanage!

I'm a computational chemist with a passion for molecular modeling, quantum mechanics, and biophysics. I thrive on solving complex problems through simulation and advanced theoretical methods.

🔭 Current Projects

  • Investigating the effects of ionic liquids on squaraine-based fluorescent materials through TD-DFT and EFP/TDDFT calculations.
  • Modeling lipid membrane disruption by ionic liquids using molecular dynamics (MD) simulations.
  • Exploring the binding dynamics of TMPyP4 with G-quadruplex DNA using free-energy calculations and MD simulations.

🌱 What I’m Learning

  • Advanced EFP/TDDFT methods for modeling complex systems.
  • Exploring new tools for automating quantum mechanical region setups and data analysis with Python.

👯 Collaboration

  • I'm open to collaborations on molecular dynamics, quantum chemistry simulations, and thermodynamic modeling. Let’s work together on tackling complex challenges in biomolecular systems or material science!

💬 Ask Me About

  • Quantum Chemistry: DFT, TD-DFT, EFP methods, and their applications in studying molecular systems.
  • Molecular Dynamics: Free energy calculations, protein-ligand interactions, and lipid bilayer studies.
  • Data Analysis Automation: Using Python for custom computational tools.

📫 How to Reach Me

Popular repositories Loading

  1. chemistry-analysis-tools chemistry-analysis-tools Public

    Python

  2. AmberMD-Scripting AmberMD-Scripting Public

    Scripting utility for AMBER Molecular Dynamics simulations. This bash script automates the generation of input files for multiple trajectories, handling the stages of minimization, heating, equilib…

    Shell

  3. fr-0zt fr-0zt Public