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Support 2D yx data in Cellpose task #788

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jluethi opened this issue Jul 16, 2024 · 0 comments · Fixed by #789
Closed

Support 2D yx data in Cellpose task #788

jluethi opened this issue Jul 16, 2024 · 0 comments · Fixed by #789

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@jluethi
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jluethi commented Jul 16, 2024

Currently, the Cellpose task only supports 2D data when it's saved as czyx, cyx or zyx (e.g. 1, 2560, 2160). See original discussion here: #398

Not supporting yx data from faim-ipa has become somewhat of a blocker. The clean solution to this will come with ngio. I'll explore options to enable this in a hackier way beforehand to enable some user workflows.

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