chore: update the release process to leverage GitHub Actions #3
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name: tests | |
on: | |
push: | |
branches: | |
- "**" | |
tags: | |
- "!**" | |
workflow_call: | |
env: | |
POETRY_VERSION: 1.6 | |
jobs: | |
unit-tests: | |
runs-on: ubuntu-latest | |
environment: github-action-ci | |
strategy: | |
matrix: | |
PYTHON_VERSION: ["3.8", "3.9", "3.10", "3.11"] | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
submodules: "true" | |
- name: Set up Python ${{ matrix.PYTHON_VERSION }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.PYTHON_VERSION }} | |
- name: Get full Python version | |
id: full-python-version | |
shell: bash | |
run: echo "version=$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))")" >> $GITHUB_OUTPUT | |
- name: Install poetry | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install poetry==${{env.POETRY_VERSION}} | |
- name: Configure poetry | |
shell: bash | |
run: poetry config virtualenvs.in-project true | |
- name: Set up cache | |
uses: actions/cache@v4 | |
id: cache | |
with: | |
path: .venv | |
key: venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('**/poetry.lock') }} | |
- name: Ensure cache is healthy | |
if: steps.cache.outputs.cache-hit == 'true' | |
shell: bash | |
run: poetry run pip --version >/dev/null 2>&1 || rm -rf .venv | |
- name: Test the lock file is up to date | |
run: python -m poetry check --lock | |
- name: Install dependencies and package | |
shell: bash | |
run: | | |
poetry install --only dev | |
poetry build | |
poetry install --extras docs | |
- name: Run pytest | |
shell: bash | |
run: | | |
poetry run python -m pytest --cov=pybedlite --cov-report=xml --cov-branch | |
- name: Style checking | |
shell: bash | |
run: | | |
poetry run black --line-length 99 --check pybedlite | |
- name: Import sorting | |
shell: bash | |
run: | | |
poetry run isort --force-single-line-imports --profile black --check pybedlite | |
- name: Run lint | |
shell: bash | |
run: | | |
poetry run flake8 --config=ci/flake8.cfg pybedlite | |
- name: Run mypy | |
shell: bash | |
run: | | |
poetry run mypy -p pybedlite --config=ci/mypy.ini | |
- name: Run docs | |
shell: bash | |
run: | | |
set -euo pipefail | |
pushd docs | |
poetry run make html | |
popd | |
- name: Upload code coverage | |
uses: codecov/codecov-action@v4.5.0 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} |