add verbose logging #109
Workflow file for this run
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| name: Python package | |
| on: [push] | |
| env: | |
| POETRY_VERSION: 1.6.1 | |
| jobs: | |
| testing: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| PYTHON_VERSION: ["3.8", "3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: 'true' | |
| - name: Set up Python ${{matrix.PYTHON_VERSION}} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{matrix.PYTHON_VERSION}} | |
| - name: Get full Python version | |
| id: full-python-version | |
| shell: bash | |
| run: echo ::set-output name=version::$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))") | |
| - name: Install poetry | |
| shell: bash | |
| run: | | |
| pip install poetry==${{env.POETRY_VERSION}} | |
| - name: Configure poetry | |
| shell: bash | |
| run: poetry config virtualenvs.in-project true | |
| - name: Set up cache | |
| uses: actions/cache@v2 | |
| id: cache | |
| with: | |
| path: .venv | |
| key: venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('**/poetry.lock') }} | |
| - name: Ensure cache is healthy | |
| if: steps.cache.outputs.cache-hit == 'true' | |
| shell: bash | |
| run: poetry run pip --version >/dev/null 2>&1 || rm -rf .venv | |
| - name: Install deps | |
| shell: bash | |
| run: | | |
| poetry install --only dev | |
| poetry build | |
| poetry install --extras docs | |
| - name: Run pytest | |
| shell: bash | |
| run: | | |
| poetry run python -m pytest --cov=pybedlite --cov-report=xml --cov-branch | |
| - name: Style checking | |
| shell: bash | |
| run: | | |
| poetry run black --line-length 99 --check pybedlite | |
| - name: Run lint | |
| shell: bash | |
| run: | | |
| poetry run flake8 --config=ci/flake8.cfg pybedlite | |
| - name: Run mypy | |
| shell: bash | |
| run: | | |
| poetry run mypy -p pybedlite --config=ci/mypy.ini | |
| - name: Run docs | |
| shell: bash | |
| run: | | |
| set -euo pipefail | |
| pushd docs | |
| poetry run make html | |
| popd | |
| - name: Upload code coverage | |
| uses: codecov/codecov-action@v3.1.0 |