Merge branch 'feature/getExpression-performance' into develop #773
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on: [push, pull_request] | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
if: "! contains(github.event.head_commit.message, '[ci skip]')" | |
timeout-minutes: 30 | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) ${{ matrix.config.label }} | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: windows-latest, r: 'devel' } | |
- {os: windows-latest, r: 'release' } | |
- {os: windows-latest, r: 'oldrel' } | |
- {os: macOS-latest, r: 'devel' } | |
- {os: macOS-latest, r: 'release' } | |
- {os: macOS-latest, r: 'oldrel' } | |
- {os: ubuntu-latest, r: 'devel' } | |
- {os: ubuntu-latest, r: 'release' } | |
- {os: ubuntu-latest, r: 'oldrel' } | |
- {os: ubuntu-latest, r: 'oldrel-1' } | |
- {os: ubuntu-latest, r: 'oldrel-2' } | |
- {os: ubuntu-latest, r: '3.5' } | |
- {os: ubuntu-latest, r: 'release' , language: ko, label: ko } | |
- {os: ubuntu-latest, r: 'release' , language: zh_CN, label: zh_CN } | |
- {os: ubuntu-latest, r: 'release' , language: zh_TW, label: zh_TW } | |
- {os: ubuntu-latest, r: 'release' , globals_keepWhere: true, label: 'keepWhere' } | |
- {os: ubuntu-latest, r: 'release' , globals_keepWhere: false, label: '!keepWhere' } | |
- {os: ubuntu-latest, r: 'release' , plan: multicore, fork_multithreading_enable: false, label: 'multicore, no-multithreading-in-forks' } | |
- {os: ubuntu-latest, r: 'release' , plan: multisession, fork_multithreading_enable: false, label: 'multisession, no-multithreading-in-forks' } | |
- {os: ubuntu-latest, r: 'release' , psock_relay_immediate: false, label: 'no-immediate-relay-in-psock' } | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_KEEP_PKG_SOURCE: yes | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
## Test in other locale (optional) | |
LANGUAGE: ${{ matrix.config.language }} | |
## R CMD check | |
_R_CHECK_CRAN_INCOMING_: false | |
_R_CHECK_LENGTH_1_CONDITION_: true | |
_R_CHECK_LENGTH_1_LOGIC2_: true | |
_R_CHECK_MATRIX_DATA_: true | |
_R_CHECK_SUGGESTS_ONLY_: true | |
_R_CHECK_THINGS_IN_TEMP_DIR_: true | |
_R_CHECK_TESTS_NLINES_: 300 | |
RCMDCHECK_ERROR_ON: note | |
## Specific to futures | |
R_FUTURE_RNG_ONMISUSE: error | |
R_FUTURE_GLOBALS_KEEPWHERE: ${{ matrix.config.globals_keepWhere }} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::rcmdcheck | |
needs: check | |
- name: Install package itself (special case) | |
run: | | |
install.packages(".", repos = NULL, type = "source") ## needed by parallel workers | |
shell: Rscript {0} | |
- name: Session info | |
run: | | |
options(width = 100) | |
parallelly::availableCores(which = "all") | |
sapply(c(physical_cores = FALSE, logical_cores = TRUE), parallel::detectCores) | |
if (require(RhpcBLASctl, quietly=TRUE)) c(get_num_procs = get_num_procs(), get_num_cores = get_num_cores(), blas_get_num_procs = blas_get_num_procs(), omp_get_num_procs = omp_get_num_procs(), omp_get_max_threads = omp_get_max_threads()) | |
capabilities() | |
pkgs <- installed.packages()[, "Package"] | |
sessioninfo::session_info(pkgs, include_base = TRUE) | |
## Verify LANGUAGE settings by generating a translatable error | |
cat(sprintf("LANGUAGE=%s\n", sQuote(Sys.getenv("LANGUAGE")))) | |
cat(sprintf("locales: %s\n", sQuote(Sys.getlocale()))) | |
tryCatch(log("a"), error = conditionMessage) | |
shell: Rscript {0} | |
- name: Check | |
if: runner.os != 'Windows' | |
env: | |
## FIXME: Eventually update to 'R_FUTURE_GLOBALS_ONREFERENCE=error' | |
R_FUTURE_GLOBALS_ONREFERENCE: "warning" | |
R_FUTURE_PLAN: ${{ matrix.config.plan }} | |
R_FUTURE_FORK_ENABLE: ${{ matrix.config.fork_enable }} | |
R_FUTURE_FORK_MULTITHREADING_ENABLE: ${{ matrix.config.fork_multithreading_enable }} | |
R_FUTURE_PSOCK_RELAY_IMMEDIATE: ${{ matrix.config.psock_relay_immediate }} | |
run: | | |
if (nzchar(Sys.getenv("R_FUTURE_PLAN")) || getRversion() < "3.5.0") Sys.setenv(RCMDCHECK_ERROR_ON = "error") | |
rcmdcheck::rcmdcheck( | |
build_args = if (getRversion() < "3.5.0") "--no-build-vignettes", | |
args = c("--no-manual", "--as-cran", if (getRversion() < "3.5.0") c("--no-vignettes", "--no-build-vignettes", "--ignore-vignettes")), | |
check_dir = "check" | |
) | |
shell: Rscript {0} | |
- name: Check (Windows) | |
if: runner.os == 'Windows' | |
run: | | |
rcmdcheck::rcmdcheck( | |
args = c("--no-manual", "--as-cran", if (.Platform$OS.type == "windows" && getRversion() >= "4.2.0") "--no-multiarch"), | |
check_dir = "check" | |
) | |
shell: Rscript {0} | |
- name: Upload check results | |
if: failure() | |
uses: actions/upload-artifact@v3 | |
with: | |
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
path: check |