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Merge external FRASER counts#169

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c-mertes wants to merge 11 commits intodevgagneurlab/drop:devfrom merge_exFRASER_countsgagneurlab/drop:merge_exFRASER_countsCopy head branch name to clipboard

+380-276

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Commits on Feb 10, 2021

• initial merge of external splicing counts for FRASER

  c-mertes

  committed
  86a6be2

• fix download and add more test cases

  c-mertes

  committed
  2cce9ae

• fix test

  c-mertes

  committed
  1809e2a

• fix wget download and heatmap plotting

  c-mertes

  committed
  4e26339

Commits on Feb 22, 2021

• major revision of the aberrant splicing pipeline

  Show description for b66d1c0
  c-mertes

  committed
  b66d1c0

• fix setAutoBPPARAM function and some cleanup

  c-mertes

  committed
  7a4e982

• force to write HDF5 file

  c-mertes

  committed
  7841750

Commits on Feb 23, 2021

• fix knitr/tidyr loading and force to write HDF5

  c-mertes

  committed
  b53fd82

Commits on Feb 24, 2021

• remove the dependency on the count matrices as they get rewritten

  c-mertes

  committed
  135998a

Commits on Jul 14, 2021

• merge dev into merge_exFRASER_counts branch.

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  c-mertes

  committed
  d5e7bd6

Commits on Aug 11, 2021

• Merge branch 'dev' into merge_exFRASER_counts

  c-mertes

  committed
  8e701a1