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adds coverage for --skip_mash and --skip_extra_annoptations in tests #113

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adds coverage for --skip_mash and --skip_extra_annoptations in tests

adds coverage for --skip_mash and --skip_extra_annoptations in tests #113

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Job Run time
Python 3.9
4h 24m 54s
Python 3.9
4h 35m 19s
9h 0m 13s