DRACO-STEM

Generating high-quality meshes of cell tissue from 3D segmented images

Dual Reconstruction by Adjacency Complex Optimization (DRACO) - SAM Tissue Enhanced Mesh (STEM)

Authors:

• Guillaume Cerutti (guillaume.cerutti@inria.fr)

Institutes:

• Inria (http://www.inria.fr)

License:

• Cecill-C

Description

OpenAlea library for the reconstruction of 3D meshes from segmented shoot apical meristem (SAM) tissue images.

Requirements

• NumPy / SciPy
• OpenAlea.Image (https://github.com/openalea/openalea-components)
• OpenAlea.CellComplex (https://github.com/VirtualPlants/cellcomplex)
• VPlants.TissueAnalysis (https://github.com/VirtualPlants/tissue_analysis)

Installation

python setup.py develop