Skip to content

Issues: genomehubs/goat-data

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

14 Open 10 Closed
14 Open 10 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Include other names when parsing ENA taxonomy extra
#109 opened Jan 13, 2025 by rjchallis
Add species_name_type attribute
#108 opened Jan 10, 2025 by rjchallis
Remove organelle entries from assembly index
#107 opened Jan 10, 2025 by rjchallis
Import full chromosome counts from CCDB data About data, not code priority:medium Medium priority, requires attention at some point process:curation Data curation, including data cleaning and validation process:import Data import workflows process:integration Integration with other resources project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:enhancement Enhancement requests, suggestions for new features or modifications to existing features stack:data Related to the raw or processed data in a GenomeHubs instance
#105 opened Jan 8, 2025 by ccaio
3 tasks
@ccaio
GoaT no longer reporting results for certain taxon IDs priority:high High priority, requires attention soon process:import Data import workflows project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:bug Bug reports, unexpected or incorrect behaviour stack:data Related to the raw or processed data in a GenomeHubs instance
#103 opened Dec 3, 2024 by andrew-varley
@rjchallis
1
include other names in ENA taxonomy extra priority:high High priority, requires attention soon process:import Data import workflows project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:enhancement Enhancement requests, suggestions for new features or modifications to existing features stack:data Related to the raw or processed data in a GenomeHubs instance stack:genomehubs Related to the core GenomeHubs codebase
#101 opened Nov 26, 2024 by rjchallis
@rjchallis
Convert taxonomy fetch and init to mini pipeline priority:high High priority, requires attention soon process:import Data import workflows project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:enhancement Enhancement requests, suggestions for new features or modifications to existing features stack:data Related to the raw or processed data in a GenomeHubs instance
#100 opened Nov 20, 2024 by rjchallis
Convert assembly parsing to mini pipeline priority:high High priority, requires attention soon process:import Data import workflows project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:enhancement Enhancement requests, suggestions for new features or modifications to existing features stack:data Related to the raw or processed data in a GenomeHubs instance
#99 opened Nov 20, 2024 by rjchallis
@rjchallis
3
Refactor goat-data import workflow priority:high High priority, requires attention soon process:import Data import workflows project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:epic High level overview of tasks that are too large to be captured by a single issue stack:data Related to the raw or processed data in a GenomeHubs instance
#98 opened Nov 20, 2024 by rjchallis
6 tasks
@rjchallis
Arnica montana ploidy data About data, not code priority:medium Medium priority, requires attention at some point process:curation Data curation, including data cleaning and validation project:goat 🐐 Related to Genomes on a Tree (GOAT) reason:enhancement Enhancement requests, suggestions for new features or modifications to existing features stack:data Related to the raw or processed data in a GenomeHubs instance
#97 opened Nov 18, 2024 by ccaio
1 of 3 tasks
@ccaio
1
Repeat content display
#106 opened Oct 30, 2024 by kerstinhowe
@ccaio
1
Make variable display names prettier
#25 opened Nov 4, 2022 by Euphrasiologist
@ccaio
Add all relevant summary types to variables
#24 opened Nov 4, 2022 by Euphrasiologist
Fill missing levels in variables for goat-cli
#4 opened May 4, 2022 by Euphrasiologist
ProTip! Find all open issues with in progress development work with linked:pr.