Write HEMCO restart files to the rundir "Restarts/" subdirectory #202
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src/Core/hcoio_diagn_mod.F90 - Replace placeholder error messages with actual error messages - Cosmetic changes src/Core/hcoio_write_std_mod.F90 - In HCOIO_Write, we now write restart files (COL==2) to the rundir Restarts/ folder. Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
run/createRunDir.sh - Create a Restarts folder in the rundir, where HEMCO restart files will be stored. CHANGELOG.md - Updated accordingly Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
yantosca
added
category: Feature Request
1 task
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GEOS-Chem integration tests with this feature activated in HEMCO passed: ==============================================================================
GEOS-Chem Classic: Execution Test Results
GCClassic #a44299c GEOS-Chem submodule update: Restore Iy sink reactions
GEOS-Chem #e1c06cbfc Updated CHANGELOG.md for reading HEMCO restarts from ./Restarts
HEMCO #582ff96 Create "Restarts/" folder in HEMCO standalone rundirs
Using 24 OpenMP threads
Number of execution tests: 26
Submitted as SLURM job: 46661765
==============================================================================
Execution tests:
------------------------------------------------------------------------------
gc_05x0625_NA_47L_merra2_CH4........................Execute Simulation....PASS
gc_05x0625_NA_47L_merra2_fullchem...................Execute Simulation....PASS
gc_4x5_47L_merra2_fullchem..........................Execute Simulation....PASS
gc_4x5_47L_merra2_fullchem_TOMAS15..................Execute Simulation....PASS
gc_4x5_47L_merra2_fullchem_TOMAS40..................Execute Simulation....PASS
gc_4x5_merra2_aerosol...............................Execute Simulation....PASS
gc_4x5_merra2_carbon................................Execute Simulation....PASS
gc_4x5_merra2_CH4...................................Execute Simulation....PASS
gc_4x5_merra2_CO2...................................Execute Simulation....PASS
gc_4x5_merra2_fullchem..............................Execute Simulation....PASS
gc_4x5_merra2_fullchem_aciduptake...................Execute Simulation....PASS
gc_4x5_merra2_fullchem_APM..........................Execute Simulation....PASS
gc_4x5_merra2_fullchem_benchmark....................Execute Simulation....PASS
gc_4x5_merra2_fullchem_complexSOA...................Execute Simulation....PASS
gc_4x5_merra2_fullchem_complexSOA_SVPOA.............Execute Simulation....PASS
gc_4x5_merra2_fullchem_LuoWd........................Execute Simulation....PASS
gc_4x5_merra2_fullchem_marinePOA....................Execute Simulation....PASS
gc_4x5_merra2_fullchem_RRTMG........................Execute Simulation....PASS
gc_4x5_merra2_Hg....................................Execute Simulation....PASS
gc_4x5_merra2_metals................................Execute Simulation....PASS
gc_4x5_merra2_POPs_BaP..............................Execute Simulation....PASS
gc_4x5_merra2_tagCH4................................Execute Simulation....PASS
gc_4x5_merra2_tagCO.................................Execute Simulation....PASS
gc_4x5_merra2_tagO3.................................Execute Simulation....PASS
gc_4x5_merra2_TransportTracers......................Execute Simulation....PASS
gc_4x5_merra2_TransportTracers_LuoWd................Execute Simulation....PASS
Summary of test results:
------------------------------------------------------------------------------
Execution tests passed: 26
Execution tests failed: 0
Execution tests not yet completed: 0
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%% All execution tests passed! %%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
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GCHP execution tests passed (except tagO3, which is a known issue to be fixed later) ==============================================================================
GCHP: Execution Test Results
GCClassic #0b6d0e2 GEOS-Chem submodule update: Restore Iy sink reactions
GEOS-Chem #e1c06cbfc Updated CHANGELOG.md for reading HEMCO restarts from ./Restarts
HEMCO #582ff96 Create "Restarts/" folder in HEMCO standalone rundirs
Number of execution tests: 5
Submitted as SLURM job: 46661912
==============================================================================
Execution tests:
------------------------------------------------------------------------------
gchp_merra2_fullchem................................Execute Simulation....PASS
gchp_merra2_fullchem_benchmark......................Execute Simulation....PASS
gchp_merra2_fullchem_RRTMG..........................Execute Simulation....PASS
gchp_merra2_tagO3...................................Execute Simulation....FAIL
gchp_merra2_TransportTracers........................Execute Simulation....PASS
Summary of test results:
------------------------------------------------------------------------------
Execution tests passed: 4
Execution tests failed: 1
Execution tests not yet completed: 0 |
msulprizio
requested changes
Mar 31, 2023
run/createRunDir.sh
- Now use mkdir -p ${rundir}/Restarts to make the Restarts folder
in the HEMCO standalone rundir. This is now consistent with
the rundir script in GCClassic.
Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
msulprizio
approved these changes
Mar 31, 2023
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Name and Institution (Required)
Name: Bob Yantosca
Institution: Harvard + GCST
Confirm you have reviewed the following documentation
Describe the update
This is the companion HEMCO PR to GEOS-Chem issue geoschem/geos-chem#1665 and PR geoschem/geos-chem#1718. HEMCO restart files (in non-ESMF modeling contexts) will now be written to the
Restarts/folder of the run directory.We have also modified the
run/createRunDir.shscript for the HEMCO standalone to create aRestartsfolder in the HEMCO standalone run directory.NOTE: This must be merged concurrently with geoschem/geos-chem#1718
Expected changes
None, this is a zero-diff update. We have verified that both GEOS-Chem Classic and the HEMCO standalone can read HEMCO restart files from the
Restarts/subdiretctory:HEMCO: Opening ./Restarts/HEMCO_restart.201907020000.ncReference(s)
N/A
Related Github Issue(s)
Closes geoschem/geos-chem#1665