jabref: Update to v5.13

[malfisya]

Summary

• Full changelog can be found here
• Add homepage key to package.yml (Part of Packages missing the homepage key #411)
• Add appstream metainfo (Part of appstream: Add metainfo to all packages containing a .desktop file #1389)
• Add monitoring.yml

Test Plan

TBD

Checklist

• Package was built and tested against unstable

[davidjharder]

Does this launch for you? I get errors + no launch.

[malfisya]

No, it doesn't launch for me either. I am still trying to figure it out.

[malfisya]

Launch error log:

 $ jabref                                                                                                                 
Messages are not initialized before accessing key: Display help on command line options
2024-07-24 06:08:00 [main] sun.util.logging.internal.LoggingProviderImpl$JULWrapper.log()
INFO: Created user preferences directory.
2024-07-24 06:08:00 [main] org.jabref.migrations.PreferencesMigrations.upgradeStoredBibEntryTypes()
INFO: Migrating old custom entry types.
2024-07-24 06:08:00 [main] org.jabref.Launcher.main()
ERROR: Unexpected exception: java.nio.file.FileSystemNotFoundException
	at jdk.zipfs/jdk.nio.zipfs.ZipFileSystemProvider.getFileSystem(ZipFileSystemProvider.java:156)
	at jdk.zipfs/jdk.nio.zipfs.ZipFileSystemProvider.getPath(ZipFileSystemProvider.java:142)
	at java.base/java.nio.file.Path.of(Path.java:209)
	at org.jabref@5.13/org.jabref.logic.net.ssl.TrustStoreManager.createTruststoreFileIfNotExist(TrustStoreManager.java:151)
	at org.jabref@5.13/org.jabref.Launcher.configureSSL(Launcher.java:202)
	at org.jabref@5.13/org.jabref.Launcher.main(Launcher.java:83)

[A108384]

I was able to get this to build and launch. I should have asked first, but I created a new PR referenced above.

Is there a way that I should build on top of this one or what is the correct process for me to help with this?

[malfisya]

Nah, it is fine. You already make a new PR anyway. I don't feel like working on this anymore, so I will close this. Cheers!