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This Repository contains the complete course material for the First TIGR2ESS FP2/FP3 Workshop on R for Genomics and Data Mining.

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R4R

Workshop Content

R4R is the First TIGR2ESS FP2/FP3 Bioinformatics Workshop on R for Genomics and Data Mining, scheduled to be held at the India Habitat Centre (IHC) New Delhi, from Feb 24, 2019 to March 01, 2019. This is a six day long workshop with lectures, Hands-on modules and exercises for use of 'R' in biological data analysis and advanced crop genomics. We will also explore techniques for data mining and analysis of scientific literature using ContentMine Software. The workshop is expected to be very data intensive and delegates are required to fully attend all days.

Program Overview and Social Media HashTags

  • Please find the Workshop program here.

  • The Program Banner is here

  • Please use our Hashtags #R4R and #TIGR2ESS when you tweet or post about the events!

Course Pages

Day 01 : Evening Meet & Greet. Dinner

Day 02 : Biological Data Anlysis using R

Day 03 : Data Manipulation and Graphics in R

Day 04 : Practical Genomics Analysis

Day 05 : Crop Genetics and Marker Development

Day 06 : Text and Data Mining using Contentmine Software

Instructors

Dr Gitanjali Yadav | University of Cambridge/NIPGR

Dr Ashley Sawle | Cancer Research UK

Dr Alison Bentley | NIAB

Dr Sigrid Heuer | Rothamsted Research

Dr Peter Murray Rust | ContentMine

Helpers and Volunteers

We are grateful to our very enthusiastic Delhi Science student community who have graciously stepped forward to help us as Volunteers on this workshop!

Mr. Amit Yadav, NIPGR

Mr. Ambarish Kumar, NIPGR

Ms. Vinita Mehlawat, NIPGR

Mr. Nagendra Singh, NIPGR

Mr. Priyesh Agarwal, NII

Ms. Saumya Priyadarshini, JNU

The Volunteers will be part of the workshop and assist with any issues from set up and installation to data checks and course exercises. Please feel free to request them for any support you may wish to have.

About The Venue:

The India Habitat Centre (IHC) is a multipurpose Learning Institution, one of India’s most comprehensive convention centres. Spread over an area of nine acres, the IHC campus has been designed to create an island of architectural excellence in the busy metropolis of India’s capital, New Delhi. Representative of “ecology by design, the IHC remains one of India's most successful works of urban design. A city within a city, the IHC is a hub of activity while simultaneously being serene, weaving a unique interplay of institutions, supporting infrastructure and facilities such as conference venues, auditoria, hospitality areas, the library and resource centre, and art galleries. It is an intellectual shopping centre that provides free exhibitions, great theatre, cutting edge art and wonderful outdoor spaces that are comfortable in all seasons.

Optional Events

There are a number of optional events during the evenings, on some days of the workshop.

24th Feb, 5pm

Informal Social Evening - Meet & Greet | NIPGR| Dinner included

25th Feb, 7pm

Photography & Sustainability (Toby Smith & Gitanjali Yadav) | India Habitat Centre Amphitheatre

On the evening of Day 02, Dr. Gitanjali Yadav will join Photojurnalist Toby Smith the IHC PhotoSphere to talk about Tigr2ess, a major international program on sustainable food production and resource use in India, while Smith will share compelling imagery and narratives from both the research and field sites. The Photosphere is the first biennial photo-festival in the world that brings together spheres of photography and sustainability through mentorship, exhibitions, workshops and talks! Event is Public and Free to attend, all are welcome.

More Information Here

26th Feb, 5pm

Cultural Evening: Kabir & Other Mystics (Shabnam Virmani) | NIPGR | Dinner included

Shabnam Virmani is a filmmaker, singer and artist in residence at the Srishti Institute of Art, Design and Technology, Bangalore. She plays a 5-stringed tambura herself and will sing a unique repertoire of folk songs of Kabir and other mystic poets from 15th century India, with English translations for academicians, at the interface of Kabir and Buddhism.

More Information Here.

28th Feb, 2pm

Career Development Workshop for Early Career Researchers | IHC | High Tea Included

Dr Savita Ayyar is a Research Management professional and consultant with over ten years of experience in diverse areas of the field. She will join TIGR2ESS Program Managers Rose Eicheberger and Aakriti Wanchoo to conduct a career crafting skills workshop on the afternoon of Feb 28, 2019.

More Information Here.

Workshop Dates:

Sunday, 24 February, 2019 - 17:00 to Friday, 1 March, 2019 - 17:30

Workshop Event Venue:

Casuarina Hall, India Habitat Centre Lodhi Road, New Delhi-110003, India

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This Repository contains the complete course material for the First TIGR2ESS FP2/FP3 Workshop on R for Genomics and Data Mining.

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