ci: use newer action versions, replacing node 12 EOL ones

Older versions of some GitHub Actions used node 12 which is EOL.
This updates all actions to their latest versions.

See: https://github.blog/changelog/2022-09-22-github-actions-all-actions-will-begin-running-on-node16-instead-of-node12/

.github/workflows/aggregate-ci.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: data-serving/scripts/aggregate-covid19/aggregate
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.9
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.9
  - name: Lint with flake8

.github/workflows/aggregate-deploy.yml

@@ -13,7 +13,7 @@ jobs:
  deploy:
  runs-on: ubuntu-20.04
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:

.github/workflows/api-python-tests.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: api/python
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.9
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.9
  - name: Install dependencies

.github/workflows/completeness.yml

@@ -11,15 +11,15 @@ jobs:
  run:
  working-directory: ingestion/monitoring
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:
  aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
  aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
  aws-region: eu-central-1
  - name: Set up Python 3.9
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.9
  - name: Install dependencies

.github/workflows/curator-api-node.yml

@@ -20,9 +20,9 @@ jobs:
  runs-on: ubuntu-20.04
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Use Node.js
- uses: actions/setup-node@v1
+ uses: actions/setup-node@v3
  with:
  node-version: "12.x"
  - name: Build and test
@@ -34,6 +34,6 @@ jobs:
  env:
  CI: true
  - name: Upload test coverage
- uses: codecov/codecov-action@v1
+ uses: codecov/codecov-action@v3
  with:
  file: verification/curator-service/api/coverage/coverage-final.json

.github/workflows/curator-service-package.yml

@@ -24,7 +24,7 @@ jobs:
  contents: read
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  -
  name: Prepare
  id: prep
@@ -45,14 +45,14 @@ jobs:
  echo ::set-output name=version::${VERSION}
  echo ::set-output name=tags::${TAGS}
  echo ::set-output name=created::$(date -u +'%Y-%m-%dT%H:%M:%SZ')
- - uses: docker/login-action@v1
+ - uses: docker/login-action@v2
  with:
  username: ${{ github.actor }}
  # https://github.com/globaldothealth/list/settings/secrets
  # https://docs.github.com/en/packages/getting-started-with-github-container-registry/migrating-to-github-container-registry-for-docker-images#authenticating-with-the-container-registry
  password: ${{ secrets.GITHUB_TOKEN }}
  registry: ghcr.io
- - uses: docker/build-push-action@v2
+ - uses: docker/build-push-action@v3
  with:
  file: verification/curator-service/Dockerfile
  push: true

.github/workflows/curator-ui-node.yml

@@ -20,9 +20,9 @@ jobs:
  runs-on: ubuntu-20.04
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Use Node.js
- uses: actions/setup-node@v1
+ uses: actions/setup-node@v3
  with:
  node-version: "12.x"
  - name: Build and test
@@ -36,6 +36,6 @@ jobs:
  env:
  CI: true
  - name: Upload test coverage
- uses: codecov/codecov-action@v1
+ uses: codecov/codecov-action@v3
  with:
  file: verification/curator-service/ui/coverage/coverage-final.json

.github/workflows/data-service-node.yml

@@ -20,9 +20,9 @@ jobs:
  runs-on: ubuntu-20.04
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Use Node.js
- uses: actions/setup-node@v1
+ uses: actions/setup-node@v3
  with:
  node-version: "12.x"
  - name: Build and test
@@ -34,6 +34,6 @@ jobs:
  env:
  CI: true
  - name: Upload test coverage
- uses: codecov/codecov-action@v1
+ uses: codecov/codecov-action@v3
  with:
  file: data-serving/data-service/coverage/coverage-final.json

.github/workflows/data-service-package.yml

@@ -23,7 +23,7 @@ jobs:
  contents: read
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  -
  name: Prepare
  id: prep
@@ -42,14 +42,14 @@ jobs:
  TAGS="$TAGS,${DOCKER_IMAGE}:sha-${GITHUB_SHA::8}"
  fi
  echo ::set-output name=tags::${TAGS}
- - uses: docker/login-action@v1
+ - uses: docker/login-action@v2
  with:
  username: ${{ github.actor }}
  # https://github.com/globaldothealth/list/settings/secrets
  # https://docs.github.com/en/packages/getting-started-with-github-container-registry/migrating-to-github-container-registry-for-docker-images#authenticating-with-the-container-registry
  password: ${{ secrets.GITHUB_TOKEN }}
  registry: ghcr.io
- - uses: docker/build-push-action@v2
+ - uses: docker/build-push-action@v3
  with:
  file: data-serving/data-service/Dockerfile
  push: true

.github/workflows/export-deploy.yml

@@ -13,7 +13,7 @@ jobs:
  deploy:
  runs-on: ubuntu-20.04
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:

.github/workflows/export-tests.yml

@@ -21,9 +21,9 @@ jobs:
  run:
  working-directory: data-serving/scripts/export-data
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.10
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: '3.10'
  - name: Lint with shellcheck

.github/workflows/freshness.yml

@@ -11,15 +11,15 @@ jobs:
  run:
  working-directory: ingestion/monitoring
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:
  aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
  aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
  aws-region: eu-central-1
  - name: Set up Python 3.9
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.9
  - name: Install dependencies

.github/workflows/geocoding-service-package.yml

@@ -23,7 +23,7 @@ jobs:
  contents: read
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  -
  name: Prepare
  id: prep
@@ -42,14 +42,14 @@ jobs:
  TAGS="$TAGS,${DOCKER_IMAGE}:sha-${GITHUB_SHA::8}"
  fi
  echo ::set-output name=tags::${TAGS}
- - uses: docker/login-action@v1
+ - uses: docker/login-action@v2
  with:
  username: ${{ github.actor }}
  # https://github.com/globaldothealth/list/settings/secrets
  # https://docs.github.com/en/packages/getting-started-with-github-container-registry/migrating-to-github-container-registry-for-docker-images#authenticating-with-the-container-registry
  password: ${{ secrets.GITHUB_TOKEN }}
  registry: ghcr.io
- - uses: docker/build-push-action@v2
+ - uses: docker/build-push-action@v3
  with:
  file: geocoding/location-service/Dockerfile
  push: true

.github/workflows/geocoding-service-python.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: geocoding/location-service
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.8
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.8
  - name: Lint with flake8

.github/workflows/ingestion-cleanup-deploy.yml

@@ -18,7 +18,7 @@ jobs:
  deploy:
  runs-on: ubuntu-20.04
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:

.github/workflows/ingestion-functions-deploy.yml

@@ -16,7 +16,7 @@ jobs:
  deploy:
  runs-on: ubuntu-20.04
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:

.github/workflows/ingestion-functions-python.yml

@@ -21,9 +21,9 @@ jobs:
  run:
  working-directory: ingestion/functions
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.8
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.8
  - name: Lint with flake8

.github/workflows/integration-tests.yml

@@ -28,7 +28,7 @@ jobs:
  name: Cypress tests on ${{ matrix.browser }}
 
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Build stack
  run: docker-compose -f dev/docker-compose.yml -f dev/docker-compose.ci.yml up --build -d -V
  - uses: cypress-io/github-action@v4

.github/workflows/kubemon.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: k8s/monitoring
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.10
- uses: actions/setup-python@v1
+ uses: actions/setup-python@v4
  with:
  python-version: '3.10'
  - name: Set up poetry

.github/workflows/monitoring-notify.yml

@@ -12,7 +12,7 @@ jobs:
  run:
  working-directory: ingestion/monitoring
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:
@@ -21,7 +21,7 @@ jobs:
  aws-region: eu-central-1
 
  - name: Set up Python 3.8
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.8
  - name: Install dependencies

.github/workflows/monitoring-tests.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: ingestion/monitoring
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.9
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.9
  - name: Install dependencies

.github/workflows/prune-deploy.yml

@@ -13,7 +13,7 @@ jobs:
  deploy:
  runs-on: ubuntu-20.04
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Configure AWS credentials
  uses: aws-actions/configure-aws-credentials@v1
  with:

.github/workflows/prune-uploads-tests.yml

@@ -21,9 +21,9 @@ jobs:
  run:
  working-directory: data-serving/scripts/prune-uploads
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.9
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: 3.9
  - name: Install dependencies

.github/workflows/r-package.yml

@@ -18,7 +18,7 @@ jobs:
  run:
  working-directory: api/R
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - uses: r-lib/actions/setup-r@v2
  with:
  r-version: '4.1'

.github/workflows/reusable-data-service-ci.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: data-serving/reusable-data-service
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.10
- uses: actions/setup-python@v2
+ uses: actions/setup-python@v4
  with:
  python-version: '3.10.5'
  - name: Lint with flake8

.github/workflows/suggest-python.yml

@@ -19,9 +19,9 @@ jobs:
  run:
  working-directory: suggest/acronyms
  steps:
- - uses: actions/checkout@v2
+ - uses: actions/checkout@v3
  - name: Set up Python 3.8
- uses: actions/setup-python@v1
+ uses: actions/setup-python@v4
  with:
  python-version: 3.8
  - name: Install dependencies

.github/workflows/update-dev-curator-db-schema.yml

@@ -15,10 +15,10 @@ jobs:
 
  steps:
  - name: Checkout
- uses: actions/checkout@v2
+ uses: actions/checkout@v3
 
  - name: Set up Node.js
- uses: actions/setup-node@v1
+ uses: actions/setup-node@v3
  with:
  node-version: "12.x"