starting build "5700aebc-de58-4e6a-96d3-a176bf0a9d87"

FETCHSOURCE
hint: Using 'master' as the name for the initial branch. This default branch name
hint: is subject to change. To configure the initial branch name to use in all
hint: of your new repositories, which will suppress this warning, call:
hint:
hint: 	git config --global init.defaultBranch <name>
hint:
hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and
hint: 'development'. The just-created branch can be renamed via this command:
hint:
hint: 	git branch -m <name>
Initialized empty Git repository in /workspace/.git/
From https://github.com/google/fhir-data-pipes
 * branch            5656fe1530c127723c07666f9b694112a1e7fcd9 -> FETCH_HEAD
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HEAD is now at 5656fe1 Bump hapi.fhir.version from 7.6.0 to 7.6.1
BUILD
Starting Step #0 - "Launch HAPI Source Server"
Starting Step #4 - "Compile Bunsen and Pipeline"
Starting Step #2 - "Launch Sink Server JDBC"
Starting Step #5 - "Build Uploader Image"
Starting Step #7 - "Build E2E Image"
Starting Step #1 - "Launch Sink Server Search"
Step #0 - "Launch HAPI Source Server": Pulling image: docker/compose
Step #4 - "Compile Bunsen and Pipeline": Pulling image: maven:3.8.5-openjdk-17
Step #2 - "Launch Sink Server JDBC": Pulling image: docker/compose
Step #1 - "Launch Sink Server Search": Pulling image: docker/compose
Step #5 - "Build Uploader Image": Already have image (with digest): gcr.io/cloud-builders/docker
Step #7 - "Build E2E Image": Already have image (with digest): gcr.io/cloud-builders/docker
Step #0 - "Launch HAPI Source Server": Using default tag: latest
Step #1 - "Launch Sink Server Search": Using default tag: latest
Step #2 - "Launch Sink Server JDBC": Using default tag: latest
Step #7 - "Build E2E Image": Sending build context to Docker daemon  66.43MB

Step #7 - "Build E2E Image": Step 1/14 : FROM maven:3.8.7-eclipse-temurin-17-focal
Step #5 - "Build Uploader Image": Sending build context to Docker daemon  1.466MB

Step #5 - "Build Uploader Image": Step 1/10 : FROM python:3.7-slim
Step #1 - "Launch Sink Server Search": latest: Pulling from docker/compose
Step #1 - "Launch Sink Server Search": aad63a933944: Pulling fs layer
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Pulling fs layer
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Pulling fs layer
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Pulling fs layer
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Waiting
Step #0 - "Launch HAPI Source Server": latest: Pulling from docker/compose
Step #0 - "Launch HAPI Source Server": aad63a933944: Pulling fs layer
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Pulling fs layer
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Pulling fs layer
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Pulling fs layer
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Waiting
Step #4 - "Compile Bunsen and Pipeline": 3.8.5-openjdk-17: Pulling from library/maven
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Verifying Checksum
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Download complete
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Verifying Checksum
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Download complete
Step #0 - "Launch HAPI Source Server": aad63a933944: Download complete
Step #1 - "Launch Sink Server Search": aad63a933944: Download complete
Step #1 - "Launch Sink Server Search": aad63a933944: Pull complete
Step #0 - "Launch HAPI Source Server": aad63a933944: Pull complete
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Verifying Checksum
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Verifying Checksum
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Download complete
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Download complete
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Pull complete
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Pull complete
Step #2 - "Launch Sink Server JDBC": latest: Pulling from docker/compose
Step #2 - "Launch Sink Server JDBC": aad63a933944: Already exists
Step #2 - "Launch Sink Server JDBC": b396cd7cbac4: Already exists
Step #2 - "Launch Sink Server JDBC": 0426ec0ed60a: Pulling fs layer
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Pulling fs layer
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Waiting
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Waiting
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Waiting
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Waiting
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Waiting
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Waiting
Step #5 - "Build Uploader Image": 3.7-slim: Pulling from library/python
Step #7 - "Build E2E Image": 3.8.7-eclipse-temurin-17-focal: Pulling from library/maven
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Verifying Checksum
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Download complete
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Verifying Checksum
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Download complete
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Verifying Checksum
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Download complete
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Pull complete
Step #2 - "Launch Sink Server JDBC": 0426ec0ed60a: Pull complete
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Pull complete
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Download complete
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Pull complete
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Pull complete
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Pull complete
Step #1 - "Launch Sink Server Search": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #0 - "Launch HAPI Source Server": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #2 - "Launch Sink Server JDBC": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #0 - "Launch HAPI Source Server": Status: Image is up to date for docker/compose:latest
Step #2 - "Launch Sink Server JDBC": Status: Downloaded newer image for docker/compose:latest
Step #1 - "Launch Sink Server Search": Status: Downloaded newer image for docker/compose:latest
Step #2 - "Launch Sink Server JDBC": docker.io/docker/compose:latest
Step #1 - "Launch Sink Server Search": docker.io/docker/compose:latest
Step #0 - "Launch HAPI Source Server": docker.io/docker/compose:latest
Step #5 - "Build Uploader Image": a803e7c4b030: Pulling fs layer
Step #5 - "Build Uploader Image": bf3336e84c8e: Pulling fs layer
Step #5 - "Build Uploader Image": 8973eb85275f: Pulling fs layer
Step #5 - "Build Uploader Image": f9afc3cc0135: Pulling fs layer
Step #5 - "Build Uploader Image": 39312d8b4ab7: Pulling fs layer
Step #5 - "Build Uploader Image": a803e7c4b030: Waiting
Step #5 - "Build Uploader Image": f9afc3cc0135: Waiting
Step #5 - "Build Uploader Image": bf3336e84c8e: Waiting
Step #5 - "Build Uploader Image": 8973eb85275f: Waiting
Step #5 - "Build Uploader Image": 39312d8b4ab7: Waiting
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Download complete
Step #7 - "Build E2E Image": 7608715873ec: Pulling fs layer
Step #7 - "Build E2E Image": 64a0b7566174: Pulling fs layer
Step #7 - "Build E2E Image": 414e25888ba9: Pulling fs layer
Step #7 - "Build E2E Image": fa1796814410: Pulling fs layer
Step #7 - "Build E2E Image": dc3ab4515b24: Pulling fs layer
Step #7 - "Build E2E Image": 495d1ae42cb9: Pulling fs layer
Step #7 - "Build E2E Image": 66b6d86e5b33: Pulling fs layer
Step #7 - "Build E2E Image": 90062ecd5dec: Pulling fs layer
Step #7 - "Build E2E Image": dc3ab4515b24: Waiting
Step #7 - "Build E2E Image": 7608715873ec: Waiting
Step #7 - "Build E2E Image": 64a0b7566174: Waiting
Step #7 - "Build E2E Image": 495d1ae42cb9: Waiting
Step #7 - "Build E2E Image": 414e25888ba9: Waiting
Step #7 - "Build E2E Image": fa1796814410: Waiting
Step #7 - "Build E2E Image": 90062ecd5dec: Waiting
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Download complete
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Download complete
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Pull complete
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Download complete
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Download complete
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Download complete
Step #5 - "Build Uploader Image": bf3336e84c8e: Verifying Checksum
Step #5 - "Build Uploader Image": bf3336e84c8e: Download complete
Step #5 - "Build Uploader Image": a803e7c4b030: Verifying Checksum
Step #5 - "Build Uploader Image": a803e7c4b030: Download complete
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Pull complete
Step #5 - "Build Uploader Image": f9afc3cc0135: Verifying Checksum
Step #5 - "Build Uploader Image": f9afc3cc0135: Download complete
Step #5 - "Build Uploader Image": 8973eb85275f: Verifying Checksum
Step #5 - "Build Uploader Image": 8973eb85275f: Download complete
Step #5 - "Build Uploader Image": 39312d8b4ab7: Verifying Checksum
Step #5 - "Build Uploader Image": 39312d8b4ab7: Download complete
Step #7 - "Build E2E Image": 64a0b7566174: Verifying Checksum
Step #7 - "Build E2E Image": 64a0b7566174: Download complete
Step #7 - "Build E2E Image": 7608715873ec: Verifying Checksum
Step #7 - "Build E2E Image": 7608715873ec: Download complete
Step #5 - "Build Uploader Image": a803e7c4b030: Pull complete
Step #7 - "Build E2E Image": fa1796814410: Download complete
Step #7 - "Build E2E Image": dc3ab4515b24: Verifying Checksum
Step #7 - "Build E2E Image": dc3ab4515b24: Download complete
Step #5 - "Build Uploader Image": bf3336e84c8e: Pull complete
Step #7 - "Build E2E Image": 495d1ae42cb9: Verifying Checksum
Step #7 - "Build E2E Image": 495d1ae42cb9: Download complete
Step #7 - "Build E2E Image": 7608715873ec: Pull complete
Step #7 - "Build E2E Image": 66b6d86e5b33: Verifying Checksum
Step #7 - "Build E2E Image": 66b6d86e5b33: Download complete
Step #7 - "Build E2E Image": 90062ecd5dec: Verifying Checksum
Step #7 - "Build E2E Image": 90062ecd5dec: Download complete
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Pull complete
Step #5 - "Build Uploader Image": 8973eb85275f: Pull complete
Step #5 - "Build Uploader Image": f9afc3cc0135: Pull complete
Step #5 - "Build Uploader Image": 39312d8b4ab7: Pull complete
Step #5 - "Build Uploader Image": Digest: sha256:b53f496ca43e5af6994f8e316cf03af31050bf7944e0e4a308ad86c001cf028b
Step #5 - "Build Uploader Image": Status: Downloaded newer image for python:3.7-slim
Step #5 - "Build Uploader Image":  ---> a255ffcb469f
Step #5 - "Build Uploader Image": Step 2/10 : WORKDIR /uploader
Step #7 - "Build E2E Image": 64a0b7566174: Pull complete
Step #5 - "Build Uploader Image":  ---> Running in 501b0ecb1eb8
Step #5 - "Build Uploader Image": Removing intermediate container 501b0ecb1eb8
Step #5 - "Build Uploader Image":  ---> df3bfb1be9e8
Step #5 - "Build Uploader Image": Step 3/10 : COPY  ./ ./
Step #7 - "Build E2E Image": 414e25888ba9: Verifying Checksum
Step #7 - "Build E2E Image": 414e25888ba9: Download complete
Step #5 - "Build Uploader Image":  ---> 7271be916942
Step #5 - "Build Uploader Image": Step 4/10 : RUN pip install -r requirements.txt
Step #5 - "Build Uploader Image":  ---> Running in 355a7a3f0416
Step #2 - "Launch Sink Server JDBC": Creating volume "sink-server-jdbc_hapi-data" with default driver
Step #1 - "Launch Sink Server Search": Creating volume "sink-server-search_hapi-data" with default driver
Step #0 - "Launch HAPI Source Server": Creating network "hapi-compose_default" with the default driver
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Pull complete
Step #0 - "Launch HAPI Source Server": Creating volume "hapi-compose_hapi-fhir-db" with default driver
Step #2 - "Launch Sink Server JDBC": Pulling sink-server (hapiproject/hapi:latest)...
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Pull complete
Step #7 - "Build E2E Image": 414e25888ba9: Pull complete
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Pull complete
Step #7 - "Build E2E Image": fa1796814410: Pull complete
Step #0 - "Launch HAPI Source Server": Creating volume "hapi-compose_hapi-server" with default driver
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Pull complete
Step #4 - "Compile Bunsen and Pipeline": Digest: sha256:3a9c30b3af6278a8ae0007d3a3bf00fff80ec3ed7ae4eb9bfa1772853101549b
Step #4 - "Compile Bunsen and Pipeline": Status: Downloaded newer image for maven:3.8.5-openjdk-17
Step #4 - "Compile Bunsen and Pipeline": docker.io/library/maven:3.8.5-openjdk-17
Step #1 - "Launch Sink Server Search": Pulling sink-server (hapiproject/hapi:latest)...
Step #5 - "Build Uploader Image": Collecting google-auth
Step #5 - "Build Uploader Image":   Downloading google_auth-2.37.0-py2.py3-none-any.whl (209 kB)
Step #0 - "Launch HAPI Source Server": Pulling db (postgres:)...
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 209.8/209.8 kB 957.9 kB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting mock
Step #5 - "Build Uploader Image":   Downloading mock-5.1.0-py3-none-any.whl (30 kB)
Step #7 - "Build E2E Image": dc3ab4515b24: Pull complete
Step #5 - "Build Uploader Image": Collecting requests
Step #5 - "Build Uploader Image":   Downloading requests-2.31.0-py3-none-any.whl (62 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 62.6/62.6 kB 656.7 kB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting pyasn1-modules>=0.2.1
Step #5 - "Build Uploader Image":   Downloading pyasn1_modules-0.3.0-py2.py3-none-any.whl (181 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 181.3/181.3 kB 2.6 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting rsa<5,>=3.1.4
Step #7 - "Build E2E Image": 495d1ae42cb9: Pull complete
Step #5 - "Build Uploader Image":   Downloading rsa-4.9-py3-none-any.whl (34 kB)
Step #5 - "Build Uploader Image": Collecting cachetools<6.0,>=2.0.0
Step #5 - "Build Uploader Image":   Downloading cachetools-5.5.0-py3-none-any.whl (9.5 kB)
Step #7 - "Build E2E Image": 66b6d86e5b33: Pull complete
Step #7 - "Build E2E Image": 90062ecd5dec: Pull complete
Step #5 - "Build Uploader Image": Collecting certifi>=2017.4.17
Step #5 - "Build Uploader Image":   Downloading certifi-2024.12.14-py3-none-any.whl (164 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 164.9/164.9 kB 12.0 MB/s eta 0:00:00
Step #2 - "Launch Sink Server JDBC": latest: Pulling from hapiproject/hapi
Step #7 - "Build E2E Image": Digest: sha256:ad4b34f02e52164df83182a2a05074b5288d6e6bcc2dfa0ce3d6fa43ec8b557f
Step #5 - "Build Uploader Image": Collecting idna<4,>=2.5
Step #5 - "Build Uploader Image":   Downloading idna-3.10-py3-none-any.whl (70 kB)
Step #7 - "Build E2E Image": Status: Downloaded newer image for maven:3.8.7-eclipse-temurin-17-focal
Step #7 - "Build E2E Image":  ---> 896b49b4d0b7
Step #7 - "Build E2E Image": Step 2/14 : RUN apt-get update && apt-get install -y jq  python3.8 python3-pip
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 70.4/70.4 kB 11.0 MB/s eta 0:00:00
Step #7 - "Build E2E Image":  ---> Running in f9e1d2e2ee7f
Step #5 - "Build Uploader Image": Collecting charset-normalizer<4,>=2
Step #5 - "Build Uploader Image":   Downloading charset_normalizer-3.4.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (138 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 138.3/138.3 kB 23.2 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting urllib3<3,>=1.21.1
Step #5 - "Build Uploader Image":   Downloading urllib3-2.0.7-py3-none-any.whl (124 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 124.2/124.2 kB 23.6 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting pyasn1<0.6.0,>=0.4.6
Step #5 - "Build Uploader Image":   Downloading pyasn1-0.5.1-py2.py3-none-any.whl (84 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 84.9/84.9 kB 14.2 MB/s eta 0:00:00
Step #7 - "Build E2E Image": Get:1 http://security.ubuntu.com/ubuntu focal-security InRelease [128 kB]
Step #1 - "Launch Sink Server Search": latest: Pulling from hapiproject/hapi
Step #5 - "Build Uploader Image": Installing collected packages: urllib3, pyasn1, mock, idna, charset-normalizer, certifi, cachetools, rsa, requests, pyasn1-modules, google-auth
Step #7 - "Build E2E Image": Get:2 http://archive.ubuntu.com/ubuntu focal InRelease [265 kB]
Step #7 - "Build E2E Image": Get:3 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [4,227 kB]
Step #0 - "Launch HAPI Source Server": latest: Pulling from library/postgres
Step #7 - "Build E2E Image": Get:4 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [4,157 kB]
Step #7 - "Build E2E Image": Get:5 http://security.ubuntu.com/ubuntu focal-security/multiverse amd64 Packages [30.9 kB]
Step #7 - "Build E2E Image": Get:6 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [1,296 kB]
Step #7 - "Build E2E Image": Get:7 http://archive.ubuntu.com/ubuntu focal-updates InRelease [128 kB]
Step #7 - "Build E2E Image": Get:8 http://archive.ubuntu.com/ubuntu focal-backports InRelease [128 kB]
Step #7 - "Build E2E Image": Get:9 http://archive.ubuntu.com/ubuntu focal/restricted amd64 Packages [33.4 kB]
Step #7 - "Build E2E Image": Get:10 http://archive.ubuntu.com/ubuntu focal/multiverse amd64 Packages [177 kB]
Step #7 - "Build E2E Image": Get:11 http://archive.ubuntu.com/ubuntu focal/main amd64 Packages [1,275 kB]
Step #5 - "Build Uploader Image": Successfully installed cachetools-5.5.0 certifi-2024.12.14 charset-normalizer-3.4.0 google-auth-2.37.0 idna-3.10 mock-5.1.0 pyasn1-0.5.1 pyasn1-modules-0.3.0 requests-2.31.0 rsa-4.9 urllib3-2.0.7
Step #5 - "Build Uploader Image": �[91mWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
Step #7 - "Build E2E Image": Get:12 http://archive.ubuntu.com/ubuntu focal/universe amd64 Packages [11.3 MB]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Error stacktraces are turned on.
Step #5 - "Build Uploader Image": �[0m�[91m
Step #5 - "Build Uploader Image": [notice] A new release of pip is available: 23.0.1 -> 24.0
Step #5 - "Build Uploader Image": [notice] To update, run: pip install --upgrade pip
Step #4 - "Compile Bunsen and Pipeline": [INFO] Scanning for projects...
Step #7 - "Build E2E Image": Get:13 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [4,639 kB]
Step #7 - "Build E2E Image": Get:14 http://archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 Packages [34.6 kB]
Step #7 - "Build E2E Image": Get:15 http://archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [4,426 kB]
Step #7 - "Build E2E Image": Get:16 http://archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [1,587 kB]
Step #7 - "Build E2E Image": Get:17 http://archive.ubuntu.com/ubuntu focal-backports/main amd64 Packages [55.2 kB]
Step #7 - "Build E2E Image": Get:18 http://archive.ubuntu.com/ubuntu focal-backports/universe amd64 Packages [28.6 kB]
Step #5 - "Build Uploader Image": �[0mRemoving intermediate container 355a7a3f0416
Step #5 - "Build Uploader Image":  ---> f4628d61c1ca
Step #5 - "Build Uploader Image": Step 5/10 : ENV INPUT_DIR="./test_files"
Step #5 - "Build Uploader Image":  ---> Running in a8a1ac4deff4
Step #5 - "Build Uploader Image": Removing intermediate container a8a1ac4deff4
Step #5 - "Build Uploader Image":  ---> 9199aa842f44
Step #5 - "Build Uploader Image": Step 6/10 : ENV CORES=""
Step #5 - "Build Uploader Image":  ---> Running in fe7e7003c616
Step #5 - "Build Uploader Image": Removing intermediate container fe7e7003c616
Step #5 - "Build Uploader Image":  ---> 1fb816a55741
Step #5 - "Build Uploader Image": Step 7/10 : ENV CONVERT=""
Step #5 - "Build Uploader Image":  ---> Running in cc107f35aa8e
Step #5 - "Build Uploader Image": Removing intermediate container cc107f35aa8e
Step #5 - "Build Uploader Image":  ---> 09ae5d38ad7b
Step #5 - "Build Uploader Image": Step 8/10 : ENV SINK_TYPE="HAPI"
Step #5 - "Build Uploader Image":  ---> Running in 0c6c7f592027
Step #5 - "Build Uploader Image": Removing intermediate container 0c6c7f592027
Step #5 - "Build Uploader Image":  ---> f914b5c4859c
Step #5 - "Build Uploader Image": Step 9/10 : ENV FHIR_ENDPOINT="http://localhost:8098/fhir"
Step #4 - "Compile Bunsen and Pipeline": [INFO] ------------------------------------------------------------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Reactor Build Order:
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] root                                                               [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Parent                                                      [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Extension Structure Definitions                                    [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core                                                        [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core R4                                                     [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core Stu3                                                   [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Avro                                                        [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] FHIR Analytics                                                     [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] common                                                             [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] batch                                                              [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] streaming                                                          [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] controller                                                         [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] coverage                                                           [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] Using the MultiThreadedBuilder implementation with a thread count of 32
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] -------------------< com.google.fhir.analytics:root >-------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Building root 0.2.7-SNAPSHOT                                      [1/13]
Step #4 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #5 - "Build Uploader Image":  ---> Running in 5e08d6732011
Step #5 - "Build Uploader Image": Removing intermediate container 5e08d6732011
Step #5 - "Build Uploader Image":  ---> ad477bf6d0ba
Step #5 - "Build Uploader Image": Step 10/10 : CMD cd /uploader; python main.py ${SINK_TYPE}     ${FHIR_ENDPOINT} --input_dir ${INPUT_DIR} ${CORES} ${CONVERT}
Step #5 - "Build Uploader Image":  ---> Running in 3dd66da5d554
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.12:prepare-agent (default) @ root ---
Step #5 - "Build Uploader Image": Removing intermediate container 3dd66da5d554
Step #5 - "Build Uploader Image":  ---> ea7a0ce26a2c
Step #5 - "Build Uploader Image": Successfully built ea7a0ce26a2c
Step #5 - "Build Uploader Image": Successfully tagged us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/synthea-uploader:5656fe1
Step #7 - "Build E2E Image": Fetched 34.0 MB in 3s (11.6 MB/s)
Finished Step #5 - "Build Uploader Image"
Starting Step #6 - "Run Uploader Unit Tests"
Step #6 - "Run Uploader Unit Tests": Already have image: us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/synthea-uploader:5656fe1
Step #4 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.12/org.jacoco.agent-0.8.12-runtime.jar=destfile=/workspace/target/jacoco.exec
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- maven-install-plugin:2.4:install (default-install) @ root ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/pom.xml to /root/.m2/repository/com/google/fhir/analytics/root/0.2.7-SNAPSHOT/root-0.2.7-SNAPSHOT.pom
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] ------------------< com.cerner.bunsen:bunsen-parent >-------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] ----------------< com.google.fhir.analytics:pipelines >-----------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Building Bunsen Parent 0.5.14-SNAPSHOT                            [2/13]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Building FHIR Analytics 0.2.7-SNAPSHOT                            [3/13]
Step #4 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #6 - "Run Uploader Unit Tests": ...........WARNING:uploader.Uploader:No locations found in sink. Using Unknown Location.
Step #6 - "Run Uploader Unit Tests": ...
Step #6 - "Run Uploader Unit Tests": ----------------------------------------------------------------------
Step #6 - "Run Uploader Unit Tests": Ran 14 tests in 0.049s
Step #6 - "Run Uploader Unit Tests": 
Step #6 - "Run Uploader Unit Tests": OK
Finished Step #6 - "Run Uploader Unit Tests"
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- directory-maven-plugin:1.0:highest-basedir (directories) @ pipelines ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.12:prepare-agent (default) @ bunsen-parent ---
Step #7 - "Build E2E Image": Reading package lists...
Step #4 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.12/org.jacoco.agent-0.8.12-runtime.jar=destfile=/workspace/bunsen/target/jacoco.exec
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (generate-resources) @ bunsen-parent ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] Highest basedir set to: /workspace
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.12:prepare-agent (default) @ pipelines ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.12/org.jacoco.agent-0.8.12-runtime.jar=destfile=/workspace/pipelines/target/jacoco.exec
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- license-maven-plugin:4.6:format (add-license) @ pipelines ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/src/main/resources
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- spotless-maven-plugin:2.43.0:apply (default) @ bunsen-parent ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] License Plugin is Skipped
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- spotless-maven-plugin:2.43.0:apply (default) @ pipelines ---
Step #7 - "Build E2E Image": Reading package lists...
Step #4 - "Compile
...
[Logs truncated due to log size limitations. For full logs, see https://storage.cloud.google.com/cloud-build-gh-logs/log-5700aebc-de58-4e6a-96d3-a176bf0a9d87.txt.]
...
CAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 164.0 in stage 131.0 (TID 2002) in 10 ms on 5b815bce4e4c (executor driver) (164/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 174.0 in stage 131.0 (TID 2012)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_171 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 163.0 in stage 131.0 (TID 2001) in 11 ms on 5b815bce4e4c (executor driver) (165/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_170 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 167.0 in stage 131.0 (TID 2005). 107886 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 165.0 in stage 131.0 (TID 2003). 104942 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 168.0 in stage 131.0 (TID 2006). 105320 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 175.0 in stage 131.0 (TID 2013) (5b815bce4e4c, executor driver, partition 175, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 175.0 in stage 131.0 (TID 2013)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 176.0 in stage 131.0 (TID 2014) (5b815bce4e4c, executor driver, partition 176, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 166.0 in stage 131.0 (TID 2004). 104273 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 176.0 in stage 131.0 (TID 2014)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 177.0 in stage 131.0 (TID 2015) (5b815bce4e4c, executor driver, partition 177, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 167.0 in stage 131.0 (TID 2005) in 9 ms on 5b815bce4e4c (executor driver) (166/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 169.0 in stage 131.0 (TID 2007). 104206 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 177.0 in stage 131.0 (TID 2015)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 171.0 in stage 131.0 (TID 2009). 107110 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 178.0 in stage 131.0 (TID 2016) (5b815bce4e4c, executor driver, partition 178, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 178.0 in stage 131.0 (TID 2016)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 170.0 in stage 131.0 (TID 2008). 115118 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 179.0 in stage 131.0 (TID 2017) (5b815bce4e4c, executor driver, partition 179, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 179.0 in stage 131.0 (TID 2017)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 180.0 in stage 131.0 (TID 2018) (5b815bce4e4c, executor driver, partition 180, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 180.0 in stage 131.0 (TID 2018)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 181.0 in stage 131.0 (TID 2019) (5b815bce4e4c, executor driver, partition 181, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 165.0 in stage 131.0 (TID 2003) in 11 ms on 5b815bce4e4c (executor driver) (167/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_172 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 181.0 in stage 131.0 (TID 2019)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 168.0 in stage 131.0 (TID 2006) in 11 ms on 5b815bce4e4c (executor driver) (168/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 166.0 in stage 131.0 (TID 2004) in 12 ms on 5b815bce4e4c (executor driver) (169/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 171.0 in stage 131.0 (TID 2009) in 9 ms on 5b815bce4e4c (executor driver) (170/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 169.0 in stage 131.0 (TID 2007) in 10 ms on 5b815bce4e4c (executor driver) (171/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_173 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 170.0 in stage 131.0 (TID 2008) in 9 ms on 5b815bce4e4c (executor driver) (172/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_174 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_175 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_178 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_176 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_179 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_180 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_177 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 172.0 in stage 131.0 (TID 2010). 107348 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 182.0 in stage 131.0 (TID 2020) (5b815bce4e4c, executor driver, partition 182, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 182.0 in stage 131.0 (TID 2020)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 175.0 in stage 131.0 (TID 2013). 100477 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 173.0 in stage 131.0 (TID 2011). 108342 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 172.0 in stage 131.0 (TID 2010) in 10 ms on 5b815bce4e4c (executor driver) (173/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_181 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 174.0 in stage 131.0 (TID 2012). 112785 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 183.0 in stage 131.0 (TID 2021) (5b815bce4e4c, executor driver, partition 183, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 178.0 in stage 131.0 (TID 2016). 102034 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 183.0 in stage 131.0 (TID 2021)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 184.0 in stage 131.0 (TID 2022) (5b815bce4e4c, executor driver, partition 184, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 180.0 in stage 131.0 (TID 2018). 100244 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 184.0 in stage 131.0 (TID 2022)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 185.0 in stage 131.0 (TID 2023) (5b815bce4e4c, executor driver, partition 185, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 185.0 in stage 131.0 (TID 2023)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 186.0 in stage 131.0 (TID 2024) (5b815bce4e4c, executor driver, partition 186, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 179.0 in stage 131.0 (TID 2017). 108554 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 175.0 in stage 131.0 (TID 2013) in 9 ms on 5b815bce4e4c (executor driver) (174/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 176.0 in stage 131.0 (TID 2014). 101955 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 186.0 in stage 131.0 (TID 2024)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 173.0 in stage 131.0 (TID 2011) in 11 ms on 5b815bce4e4c (executor driver) (175/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 177.0 in stage 131.0 (TID 2015). 104632 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 174.0 in stage 131.0 (TID 2012) in 10 ms on 5b815bce4e4c (executor driver) (176/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 178.0 in stage 131.0 (TID 2016) in 8 ms on 5b815bce4e4c (executor driver) (177/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 187.0 in stage 131.0 (TID 2025) (5b815bce4e4c, executor driver, partition 187, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 188.0 in stage 131.0 (TID 2026) (5b815bce4e4c, executor driver, partition 188, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 187.0 in stage 131.0 (TID 2025)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 188.0 in stage 131.0 (TID 2026)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 189.0 in stage 131.0 (TID 2027) (5b815bce4e4c, executor driver, partition 189, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 189.0 in stage 131.0 (TID 2027)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 190.0 in stage 131.0 (TID 2028) (5b815bce4e4c, executor driver, partition 190, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 180.0 in stage 131.0 (TID 2018) in 8 ms on 5b815bce4e4c (executor driver) (178/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 190.0 in stage 131.0 (TID 2028)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 179.0 in stage 131.0 (TID 2017) in 8 ms on 5b815bce4e4c (executor driver) (179/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 177.0 in stage 131.0 (TID 2015) in 9 ms on 5b815bce4e4c (executor driver) (180/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 176.0 in stage 131.0 (TID 2014) in 9 ms on 5b815bce4e4c (executor driver) (181/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 181.0 in stage 131.0 (TID 2019). 109021 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 191.0 in stage 131.0 (TID 2029) (5b815bce4e4c, executor driver, partition 191, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 191.0 in stage 131.0 (TID 2029)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 181.0 in stage 131.0 (TID 2019) in 9 ms on 5b815bce4e4c (executor driver) (182/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_182 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_185 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_183 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_184 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_187 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_190 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_189 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_186 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_188 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 182.0 in stage 131.0 (TID 2020). 110418 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 185.0 in stage 131.0 (TID 2023). 111151 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 192.0 in stage 131.0 (TID 2030) (5b815bce4e4c, executor driver, partition 192, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 183.0 in stage 131.0 (TID 2021). 104398 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 184.0 in stage 131.0 (TID 2022). 104418 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 192.0 in stage 131.0 (TID 2030)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 193.0 in stage 131.0 (TID 2031) (5b815bce4e4c, executor driver, partition 193, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 182.0 in stage 131.0 (TID 2020) in 8 ms on 5b815bce4e4c (executor driver) (183/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 193.0 in stage 131.0 (TID 2031)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 194.0 in stage 131.0 (TID 2032) (5b815bce4e4c, executor driver, partition 194, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 187.0 in stage 131.0 (TID 2025). 105407 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_191 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 194.0 in stage 131.0 (TID 2032)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 190.0 in stage 131.0 (TID 2028). 104328 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 195.0 in stage 131.0 (TID 2033) (5b815bce4e4c, executor driver, partition 195, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 195.0 in stage 131.0 (TID 2033)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 196.0 in stage 131.0 (TID 2034) (5b815bce4e4c, executor driver, partition 196, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 189.0 in stage 131.0 (TID 2027). 104437 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 197.0 in stage 131.0 (TID 2035) (5b815bce4e4c, executor driver, partition 197, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 196.0 in stage 131.0 (TID 2034)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 185.0 in stage 131.0 (TID 2023) in 8 ms on 5b815bce4e4c (executor driver) (184/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 197.0 in stage 131.0 (TID 2035)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 183.0 in stage 131.0 (TID 2021) in 9 ms on 5b815bce4e4c (executor driver) (185/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 184.0 in stage 131.0 (TID 2022) in 9 ms on 5b815bce4e4c (executor driver) (186/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 186.0 in stage 131.0 (TID 2024). 110922 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 198.0 in stage 131.0 (TID 2036) (5b815bce4e4c, executor driver, partition 198, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 187.0 in stage 131.0 (TID 2025) in 8 ms on 5b815bce4e4c (executor driver) (187/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 198.0 in stage 131.0 (TID 2036)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 190.0 in stage 131.0 (TID 2028) in 7 ms on 5b815bce4e4c (executor driver) (188/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 188.0 in stage 131.0 (TID 2026). 104974 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Starting task 199.0 in stage 131.0 (TID 2037) (5b815bce4e4c, executor driver, partition 199, PROCESS_LOCAL, 8999 bytes) 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 189.0 in stage 131.0 (TID 2027) in 8 ms on 5b815bce4e4c (executor driver) (189/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Running task 199.0 in stage 131.0 (TID 2037)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 186.0 in stage 131.0 (TID 2024) in 10 ms on 5b815bce4e4c (executor driver) (190/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 188.0 in stage 131.0 (TID 2026) in 9 ms on 5b815bce4e4c (executor driver) (191/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_192 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_193 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_195 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 191.0 in stage 131.0 (TID 2029). 106004 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_196 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_194 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 191.0 in stage 131.0 (TID 2029) in 9 ms on 5b815bce4e4c (executor driver) (192/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_197 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_199 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 193.0 in stage 131.0 (TID 2031). 110422 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 195.0 in stage 131.0 (TID 2033). 113060 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 192.0 in stage 131.0 (TID 2030). 110720 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManager: Found block rdd_211_198 locally
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 193.0 in stage 131.0 (TID 2031) in 7 ms on 5b815bce4e4c (executor driver) (193/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 192.0 in stage 131.0 (TID 2030) in 8 ms on 5b815bce4e4c (executor driver) (194/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 196.0 in stage 131.0 (TID 2034). 110789 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 195.0 in stage 131.0 (TID 2033) in 6 ms on 5b815bce4e4c (executor driver) (195/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 197.0 in stage 131.0 (TID 2035). 110419 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 194.0 in stage 131.0 (TID 2032). 109528 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 196.0 in stage 131.0 (TID 2034) in 7 ms on 5b815bce4e4c (executor driver) (196/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 197.0 in stage 131.0 (TID 2035) in 7 ms on 5b815bce4e4c (executor driver) (197/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 194.0 in stage 131.0 (TID 2032) in 8 ms on 5b815bce4e4c (executor driver) (198/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 199.0 in stage 131.0 (TID 2037). 102382 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 199.0 in stage 131.0 (TID 2037) in 7 ms on 5b815bce4e4c (executor driver) (199/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO Executor: Finished task 198.0 in stage 131.0 (TID 2036). 101875 bytes result sent to driver
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSetManager: Finished task 198.0 in stage 131.0 (TID 2036) in 9 ms on 5b815bce4e4c (executor driver) (200/200)
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSchedulerImpl: Removed TaskSet 131.0, whose tasks have all completed, from pool 
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO DAGScheduler: ResultStage 131 (toPandas at /workspace/dwh/query_lib_spark.py:147) finished in 0.194 s
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO DAGScheduler: Job 85 is finished. Cancelling potential speculative or zombie tasks for this job
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO TaskSchedulerImpl: Killing all running tasks in stage 131: Stage finished
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO DAGScheduler: Job 85 finished: toPandas at /workspace/dwh/query_lib_spark.py:147, took 0.197277 s
Step #34 - "Test Indicators": 24/12/23 07:51:08 INFO BlockManagerInfo: Removed broadcast_133_piece0 on 5b815bce4e4c:40159 in memory (size: 35.9 KiB, free: 348.7 MiB)
Step #34 - "Test Indicators": [INDICATORS_LOG 2024-12-23 07:51:10.714522] patient_obs_view size= 150109
Step #34 - "Test Indicators": [INDICATORS_LOG 2024-12-23 07:51:13.426566] Number of rows in TX_TB temp_df= 6404
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO SparkContext: Invoking stop() from shutdown hook
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO SparkContext: SparkContext is stopping with exitCode 0.
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO SparkUI: Stopped Spark web UI at http://5b815bce4e4c:4040
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO MemoryStore: MemoryStore cleared
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO BlockManager: BlockManager stopped
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO BlockManagerMaster: BlockManagerMaster stopped
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO SparkContext: Successfully stopped SparkContext
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO ShutdownHookManager: Shutdown hook called
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO ShutdownHookManager: Deleting directory /tmp/spark-671e63e9-af7f-4c45-a671-848e9a4bed83
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO ShutdownHookManager: Deleting directory /tmp/spark-671e63e9-af7f-4c45-a671-848e9a4bed83/pyspark-b7ab1ae5-1dc9-4675-a3b8-8daf87949b29
Step #34 - "Test Indicators": 24/12/23 07:51:14 INFO ShutdownHookManager: Deleting directory /tmp/spark-bc890f2b-f5d9-4ede-b5c3-b4a0fe94f5b6
Step #34 - "Test Indicators": Suppressed, non-suppressed, none, male_25 numbers are : 8,752,0,2
Step #34 - "Test Indicators": Suppressed, non-suppressed, none, male_25 ratios are : 0.0105,0.989,0,0.00263
Step #34 - "Test Indicators": TX_NEW, non-TX_NEW, none, male_25 numbers are : 95,439,0,24
Step #34 - "Test Indicators": TX_NEW, non-TX_NEW, none, male_25 ratios are : 0.178,0.822,0,0.0449
Step #34 - "Test Indicators": TB_STAT, non-TB_STAT, none, male_25 numbers are : 86,448,0,29
Step #34 - "Test Indicators": TB_STAT, non-TB_STAT, none, male_25 ratios are : 0.161,0.839,0,0.0543
Step #34 - "Test Indicators": TX_CURR, non-TX_CURR, none, male_25 numbers are : 116,418,0,29
Step #34 - "Test Indicators": TX_CURR, non-TX_CURR, none, male_25 ratios are : 0.217,0.783,0,0.0543
Step #34 - "Test Indicators": TB_ART, non-TB_ART, none, male_25 numbers are : 43,491,0,13
Step #34 - "Test Indicators": TB_ART, non-TB_ART, none, male_25 ratios are : 0.0805,0.919,0,0.0243
Step #34 - "Test Indicators": TB_PREV, non-TB_PREV, none, male_25 numbers are : 57,6.35e+03,0,8
Step #34 - "Test Indicators": TB_PREV, non-TB_PREV, none, male_25 ratios are : 0.0089,0.991,0,0.00125
Step #34 - "Test Indicators": TX_TB, non-TX_TB, none, male_25 numbers are : 0,6.4e+03,0,0
Step #34 - "Test Indicators": TX_TB, non-TX_TB, none, male_25 ratios are : 0,1,0,0
Step #34 - "Test Indicators": SUCCESS!
Finished Step #34 - "Test Indicators"
Starting Step #35 - "Turn down Webserver and HAPI Server"
Step #35 - "Turn down Webserver and HAPI Server": Already have image (with digest): docker/compose
Step #35 - "Turn down Webserver and HAPI Server": Stopping openmrs                 ... 
Step #35 - "Turn down Webserver and HAPI Server": Stopping sink-server-for-openmrs ... 
Step #35 - "Turn down Webserver and HAPI Server": Stopping openmrs-fhir-mysql      ... 
Step #35 - "Turn down Webserver and HAPI Server": �[2A�[2K
Stopping sink-server-for-openmrs ... �[32mdone�[0m
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Stopping openmrs-fhir-mysql      ... �[32mdone�[0m
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Step #35 - "Turn down Webserver and HAPI Server": Removing sink-server-for-openmrs ... 
Step #35 - "Turn down Webserver and HAPI Server": Removing openmrs-fhir-mysql      ... 
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Finished Step #35 - "Turn down Webserver and HAPI Server"
PUSH
Pushing us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/streaming-pipeline:5656fe1
The push refers to repository [us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/streaming-pipeline]
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DONE
Step #1 - "Launch Sink Server Search": �[1A�[2K
Creating sink-server-search ... �[32mdone�[0m
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Step #2 - "Launch Sink Server JDBC": �[1A�[2K
Creating sink-server-jdbc ... �[32mdone�[0m
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Step #0 - "Launch HAPI Source Server": �[2A�[2K
Creating hapi-fhir-db ... �[32mdone�[0m
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Step #19 - "Launch HAPI FHIR Sink Server Controller": �[1A�[2K
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Creating pipeline-controller ... �[32mdone�[0m
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Step #25 - "Launch OpenMRS Server and HAPI FHIR Sink Server for OpenMRS": �[1A�[2K
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