chore(deps): update all dependencies #1301

renovate-bot · 2022-08-01T05:09:34Z

This PR contains the following updates:

Package	Change	Age	Adoption	Passing	Confidence
attrs (source, changelog)	`==21.4.0` -> `==22.1.0`
certifi	`==2022.5.18.1` -> `==2022.6.15`
cffi	`==1.15.0` -> `==1.15.1`
charset-normalizer	`==2.0.12` -> `==2.1.0`
db-dtypes	`==1.0.1` -> `==1.0.2`
geopandas (source)	`==0.10.2` -> `==0.11.1`
google-api-core	`==2.8.1` -> `==2.8.2`
google-auth	`==2.6.6` -> `==2.9.1`
google-auth-oauthlib	`==0.5.1` -> `==0.5.2`
google-cloud-bigquery	`==3.2.0` -> `==3.3.0`
google-cloud-bigquery	`==3.1.0` -> `==3.3.0`
google-cloud-bigquery-storage	`==2.13.1` -> `==2.14.1`
google-cloud-core	`==2.3.0` -> `==2.3.2`
google-cloud-testutils	`==1.3.1` -> `==1.3.3`
googleapis-common-protos	`==1.56.2` -> `==1.56.4`
grpcio	`==1.46.3` -> `==1.47.0`
ipython (source)	`==8.3.0` -> `==8.4.0`
libcst (changelog)	`==0.4.3` -> `==0.4.7`
pandas (source)	`==1.4.2` -> `==1.4.3`
proto-plus	`==1.20.5` -> `==1.20.6`
protobuf	`>= 3.12.0, <4.0.0dev` -> `>=4.21.4, <4.22.0`
protobuf	`==3.20.1` -> `==4.21.4`
requests (source, changelog)	`==2.27.1` -> `==2.28.1`
rsa (source)	`==4.8` -> `==4.9`
typing-extensions (changelog)	`==4.2.0` -> `==4.3.0`
urllib3 (source)	`==1.26.9` -> `==1.26.11`

Release Notes

python-attrs/attrs

`v22.1.0`

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Backwards-incompatible Changes
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

Python 2.7 is not supported anymore.

Dealing with Python 2.7 tooling has become too difficult for a volunteer-run project.

We have supported Python 2 more than 2 years after it was officially discontinued and feel that we have paid our dues.
All version up to 21.4.0 from December 2021 remain fully functional, of course.
#936 <https://github.com/python-attrs/attrs/issues/936>_
The deprecated cmp attribute of attrs.Attribute has been removed.
This does not affect the cmp argument to attr.s that can be used as a shortcut to set eq and order at the same time.
#939 <https://github.com/python-attrs/attrs/issues/939>_

Changes
^^^^^^^

Instantiation of frozen slotted classes is now faster.
#898 <https://github.com/python-attrs/attrs/issues/898>_
If an eq key is defined, it is also used before hashing the attribute.
#909 <https://github.com/python-attrs/attrs/issues/909>_
Added attrs.validators.min_len().
#916 <https://github.com/python-attrs/attrs/issues/916>_
attrs.validators.deep_iterable()'s member_validator argument now also accepts a list of validators and wraps them in an attrs.validators.and_().
#925 <https://github.com/python-attrs/attrs/issues/925>_
Added missing type stub re-imports for attrs.converters and attrs.filters.
#931 <https://github.com/python-attrs/attrs/issues/931>_
Added missing stub for attr(s).cmp_using().
#949 <https://github.com/python-attrs/attrs/issues/949>_
attrs.validators._in()'s ValueError is not missing the attribute, expected options, and the value it got anymore.
#951 <https://github.com/python-attrs/attrs/issues/951>_
Python 3.11 is now officially supported.
#969 <https://github.com/python-attrs/attrs/issues/969>_

certifi/python-certifi

`v2022.6.15`

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ousret/charset_normalizer

`v2.1.0`

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Added

Output the Unicode table version when running the CLI with --version (PR #194)

Changed

Re-use decoded buffer for single byte character sets from @nijel (PR #175)
Fixing some performance bottlenecks from @deedy5 (PR #183)

Fixed

Workaround potential bug in cpython with Zero Width No-Break Space located in Arabic Presentation Forms-B, Unicode 1.1 not acknowledged as space (PR #175)
CLI default threshold aligned with the API threshold from @oleksandr-kuzmenko (PR #181)

Removed

Support for Python 3.5 (PR #192)

Deprecated

Use of backport unicodedata from unicodedata2 as Python is quickly catching up, scheduled for removal in 3.0 (PR #194)

googleapis/python-db-dtypes-pandas

`v1.0.2`

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Documentation

fix changelog header to consistent size (#111) (145f875)

geopandas/geopandas

`v0.11.1`

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Small bug-fix release:

Fix regression (RecursionError) in reshape methods such as unstack()
and pivot() involving MultiIndex, or GeoDataFrame construction with
MultiIndex (#2486).
Fix regression in GeoDataFrame.explode() with non-default
geometry column name.
Fix regression in apply() causing row-wise all nan float columns to be
casted to GeometryDtype (#2482).
Fix a crash in datetime column reading where the file contains mixed timezone
offsets (#2479). These will be read as UTC localized values.
Fix a crash in datetime column reading where the file contains datetimes
outside the range supported by [ns] precision (#2505).
Fix regression in passing the Parquet or Feather format version in
to_parquet and to_feather. As a result, the version parameter
for the to_parquet and to_feather methods has been replaced with
schema_version. version will be passed directly to underlying
feather or parquet writer. version will only be used to set
schema_version if version is one of 0.1.0 or 0.4.0 (#2496).

`v0.11.0`

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Highlights of this release:

The geopandas.read_file() and GeoDataFrame.to_file() methods to read and write GIS file formats can now optionally use the pyogrio package under the hood through the engine="pyogrio" keyword. The pyogrio package implements vectorized IO for GDAL/OGR vector data sources, and is faster compared to the fiona-based engine (#2225).
GeoParquet support updated to implement v0.4.0 of the OpenGeospatial/GeoParquet specification (#2441). Backwards compatibility with v0.1.0 of the metadata spec (implemented in the previous releases of GeoPandas) is guaranteed, and reading and writing Parquet and Feather files will no longer produce a UserWarning (#2327).

New features and improvements:

Improved handling of GeoDataFrame when the active geometry column is lost from the GeoDataFrame. Previously, square bracket indexing gdf[[...]] returned a GeoDataFrame when the active geometry column was retained and a DataFrame was returned otherwise. Other pandas indexing methods (loc, iloc, etc) did not follow the same rules. The new behaviour for all indexing/reshaping operations is now as follows (#2329, #2060):
- If operations produce a DataFrame containing the active geometry column, a GeoDataFrame is returned
- If operations produce a DataFrame containing GeometryDtype columns, but not the active geometry column, a GeoDataFrame is returned, where the active geometry column is set to None (set the new geometry column with set_geometry())
- If operations produce a DataFrame containing no GeometryDtype columns, a DataFrame is returned (this can be upcast again by calling set_geometry() or the GeoDataFrame constructor)
- If operations produce a Series of GeometryDtype, a GeoSeries is returned, otherwise Series is returned.
- Error messages for having an invalid geometry column have been improved, indicating the name of the last valid active geometry column set and whether other geometry columns can be promoted to the active geometry column (#2329).
Datetime fields are now read and written correctly for GIS formats which support them (e.g. GPKG, GeoJSON) with fiona 1.8.14 or higher. Previously, datetimes were read as strings (#2202).
folium.Map keyword arguments can now be specified as the map_kwds argument to GeoDataFrame.explore() method (#2315).
Add a new parameter style_function to GeoDataFrame.explore() to enable plot styling based on GeoJSON properties (#2377).
It is now possible to write an empty GeoDataFrame to a file for supported formats (#2240). Attempting to do so will now emit a UserWarning instead of a ValueError.
Fast rectangle clipping has been exposed as GeoSeries/GeoDataFrame.clip_by_rect() (#1928).
The mask parameter of GeoSeries/GeoDataFrame.clip() now accepts a rectangular mask as a list-like to perform fast rectangle clipping using the new GeoSeries/GeoDataFrame.clip_by_rect() (#2414).
Bundled demo dataset naturalearth_lowres has been updated to version 5.0.1 of the source, with field ISO_A3 manually corrected for some cases (#2418).

Deprecations and compatibility notes:

The active development branch of geopandas on GitHub has been renamed from master to main (#2277).
Deprecated methods GeometryArray.equals_exact() and GeometryArray.almost_equals() have been removed. They should
be replaced with GeometryArray.geom_equals_exact() and GeometryArray.geom_almost_equals() respectively (#2267).
Deprecated CRS functions explicit_crs_from_epsg(), epsg_from_crs() and get_epsg_file_contents() were removed (#2340).
Warning about the behaviour change to GeoSeries.isna() with empty geometries present has been removed (#2349).
Specifying a CRS in the GeoDataFrame/GeoSeries constructor which contradicted the underlying GeometryArray now raises a ValueError (#2100).
Specifying a CRS in the GeoDataFrame constructor when no geometry column is provided and calling GeoDataFrame. set_crs on a GeoDataFrame without an active geometry column now raise a ValueError (#2100)
Passing non-geometry data to theGeoSeries constructor is now fully deprecated and will raise a TypeError (#2314). Previously, a pandas.Series was returned for non-geometry data.
Deprecated GeoSeries/GeoDataFrame set operations __xor__(), __or__(), __and__() and __sub__(), geopandas.io.file.read_file/to_file and geopandas.io.sql.read_postgis now emit FutureWarning instead of DeprecationWarning and will be completely removed in a future release.
Accessing the crs of a GeoDataFrame without active geometry column is deprecated and will be removed in GeoPandas 0.12 (#2373).

Bug fixes:

GeoSeries.to_frame now creates a GeoDataFrame with the geometry column name set correctly (#2296)
Fix pickle files created with pygeos installed can not being readable when pygeos is not installed (#2237).
Fixed UnboundLocalError in GeoDataFrame.plot() using legend=True and missing_kwds (#2281).
Fix explode() incorrectly relating index to columns, including where the input index is not unique (#2292)
Fix GeoSeries.[xyz] raising an IndexError when the underlying GeoSeries contains empty points (#2335). Rows corresponding to empty points now contain np.nan.
Fix GeoDataFrame.iloc raising a TypeError when indexing a GeoDataFrame with only a single column of GeometryDtype (#1970).
Fix GeoDataFrame.iterfeatures() not returning features with the same field order as GeoDataFrame.columns (#2396).
Fix GeoDataFrame.from_features() to support reading GeoJSON with null properties (#2243).
Fix GeoDataFrame.to_parquet() not intercepting engine keyword argument, breaking consistency with pandas (#2227)
Fix GeoDataFrame.explore() producing an error when column is of boolean dtype (#2403).
Fix an issue where GeoDataFrame.to_postgis() output the wrong SRID for ESRI authority CRS (#2414).
Fix GeoDataFrame.from_dict/from_features classmethods using GeoDataFrame rather than cls as the constructor.
Fix GeoDataFrame.plot() producing incorrect colors with mixed geometry types when colors keyword is provided. (#2420)

Notes on (optional) dependencies:

GeoPandas 0.11 drops support for Python 3.7 and pandas 0.25 (the minimum supported pandas version is now 1.0.5). Further, the minimum required versions for the listed dependencies have now changed to shapely 1.7, fiona 1.8.13.post1, pyproj 2.6.1.post1, matplotlib 3.2, mapclassify 2.4.0 (#2358, #2391)

Acknowledgments

Thanks to everyone who contributed to this release!
A total of 31 people contributed patches to this release. People with a "+" by their names contributed a patch for the first time.

Akylzhan Sauranbay +
Alan D. Snow
Alyssa Ross +
Andreas Meier +
Andrii Oriekhov +
Brendan Ward
Ewout ter Hoeven +
Guillaume Lostis +
James McBride
Joris Van den Bossche
Karol Zlot +
Koshy Thomas +
Martin Fleischmann
Martina Oefelein +
Matt Richards
Mike Taves
Mjumbe Poe +
Nathan Lis +
Nicolò Lucchesi +
RadMagnus +
Ray Bell
Ryan +
Will Schlitzer
bstadlbauer +
clausmichele +
froast +
joooeey +
readthedocs-assistant +
rraymondgh +
ryanward-io +
simberaj

googleapis/python-api-core

`v2.8.2`

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Bug Fixes

deps: allow protobuf < 5.0.0 (#400) (8f73d2e)
drop support for grpc-gcp (#401) (5da6733)

Documentation

fix changelog header to consistent size (#394) (ac266e9)
Fix typo in the BackgroundConsumer docstring (#395) (0eb727f)

googleapis/google-auth-library-python

`v2.9.1`

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Bug Fixes

there was a raise missing for throwing exceptions (#1077) (d1f17b0)

`v2.9.0`

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Features

pluggable auth support (#1045) (de14f4e)

`v2.8.0`

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Features

add experimental GDCH support (#1044) (94fb5e2)

`v2.7.0`

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Features

add experimental enterprise cert support (#1052) (dda7dda)
add experimental GDCH support (#1022) (5367aac)
Pluggable auth support (#995) (62daa73)

Bug Fixes

validate urls for external accounts (#1031) (61b1f15)

Reverts

pluggable auth support #995 (#1039) (513d999)
revert experimental GDCH support (#1022) (#1042) (c720995)

Documentation

fix changelog header to consistent size (#1046) (e64d084)

GoogleCloudPlatform/google-auth-library-python-oauthlib

`v0.5.2`

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Documentation

fix changelog header to consistent size (#204) (cbd7d67)

googleapis/python-bigquery

`v3.3.0`

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Features

add destination_expiration_time property to copy job (#1277) (728b07c)

Bug Fixes

require python 3.7+ (#1284) (52d9f14)

Documentation

samples: add table snapshot sample (#1274) (e760d1b)
samples: explicitly add bq to samples reqs, upgrade grpc to fix bug on m1 (#1290) (9b7e3e4)

googleapis/python-bigquery-storage

`v2.14.1`

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Bug Fixes

deps: require google-api-core>=1.32.0,>=2.8.0 (#469) (42f7a0d)

`v2.14.0`

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Features

add audience parameter (346c719)
add fields to eventually contain row level errors (346c719)

Bug Fixes

deps: require google-api-core >= 2.8.0 (346c719)
handle AttributeError in bigquery_storage writer (#414) (2cb641a)
Modify client lib retry policy for CreateWriteStream with longer backoff, more error code and longer overall time (346c719)
require python 3.7+ (#468) (c13b1e5)

`v2.13.2`

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Bug Fixes

deps: require protobuf <4.0.0dev (#456) (b5e7719)

Documentation

fix changelog header to consistent size (#457) (143dac9)

googleapis/python-cloud-core

`v2.3.2`

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Bug Fixes

require python 3.7+ (#201) (3277c60)

`v2.3.1`

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Documentation

fix changelog header to consistent size (#194) (1b79d69)

googleapis/python-test-utils

`v1.3.3`

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Bug Fixes

require python 3.7+ (#107) (eb41a45)

`v1.3.2`

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Documentation

fix changelog header to consistent size (#100) (a446cdc)

googleapis/python-api-common-protos

`v1.56.4`

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Bug Fixes

require python 3.7+ (#119) (507b58d)

`v1.56.3`

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Bug Fixes

deps: allow protobuf < 5.0.0 (#112) (67b0231)

Documentation

fix changelog header to consistent size (#108) (d315b9f)

ipython/ipython

`v8.4.0`

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Instagram/LibCST

`v0.4.7`

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New Contributors

@Chenguang-Zhu made their first contribution in https://github.com/Instagram/LibCST/pull/720

Fixed

Fix get_qualified_names_for matching on prefixes of the given name by @lpetre in https://github.com/Instagram/LibCST/pull/719

Added

Implement lazy loading mechanism for expensive metadata providers by @Chenguang-Zhu in https://github.com/Instagram/LibCST/pull/720

`v0.4.6`

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New Contributors

@superbobry made their first contribution in https://github.com/Instagram/LibCST/pull/702

Fixed

convert_type_comments now preserves comments following type comments by @superbobry in https://github.com/Instagram/LibCST/pull/702
QualifiedNameProvider optimizations
- Cache the scope name prefix to prevent scope traversal in a tight loop by @lpetre in https://github.com/Instagram/LibCST/pull/708
- Faster qualified name formatting by @lpetre in https://github.com/Instagram/LibCST/pull/710
- Prevent unnecessary work in Scope.get_qualified_names_for_ by @lpetre in https://github.com/Instagram/LibCST/pull/709
Fix parsing of parenthesized empty tuples by @zsol in https://github.com/Instagram/LibCST/pull/712
Support whitespace after ParamSlash by @zsol in https://github.com/Instagram/LibCST/pull/713
[parser] bail on deeply nested expressions by @zsol in https://github.com/Instagram/LibCST/pull/718

`v0.4.5`

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New Contributors

@zzl0 made their first contribution in https://github.com/Instagram/LibCST/pull/704

Fixed

Only skip supported escaped characters in f-strings by @zsol in https://github.com/Instagram/LibCST/pull/700
Escaping quote characters in raw string literals causes a tokenizer error by @zsol in https://github.com/Instagram/LibCST/issues/668
Corrected a code example in the documentation by @zzl0 in https://github.com/Instagram/LibCST/pull/703
Handle multiline strings that start with quotes by @zzl0 in https://github.com/Instagram/LibCST/pull/704
Fixed a performance regression in libcst.metadata.ScopeProvider by @lpetre in https://github.com/Instagram/LibCST/pull/698

Updated

parser: use references instead of smart pointers for Tokens by @zsol in https://github.com/Instagram/LibCST/pull/691

pandas-dev/pandas

`v1.4.3`

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This is a patch release in the 1.4.x series and includes some regression and bug fixes. We recommend that all users upgrade to this version.

See the full whatsnew for a list of all the changes.

The release will be available on the defaults and conda-forge channels:

conda install pandas

Or via PyPI:

python3 -m pip install --upgrade pandas

Please report any issues with the release on the pandas issue tracker.

googleapis/proto-plus-python

`v1.20.6`

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Bug Fixes

deps: allow protobuf < 5.0.0 (#324) (af4f56e)

Documentation

fix changelog header to consistent size (#319) (27d2003)

psf/requests

`v2.28.1`

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Improvements

Speed optimization in iter_content with transition to yield from. (#6170)

Dependencies

Added support for chardet 5.0.0 (#6179)
Added support for charset-normalizer 2.1.0 (#6169)

`v2.28.0`

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Deprecations

⚠️ Requests has officially dropped support for Python 2.7. ⚠️ (#6091)
Requests has officially dropped support for Python 3.6 (including pypy3.6). (#6091)

Improvements

Wrap JSON parsing issues in Request's JSONDecodeError for payloads without
an encoding to make json() API consistent. (#6097)
Parse header components consistently, raising an InvalidHeader error in
all invalid cases. (#6154)
Added provisional 3.11 support with current beta build. (#6155)
Requests got a makeover and we decided to paint it black. (#6095)

Bugfixes

Fixed bug where setting CURL_CA_BUNDLE to an empty string would disable
cert verification. All Requests 2.x versions before 2.28.0 are affected. (#6074)
Fixed urllib3 exception leak, wrapping urllib3.exceptions.SSLError with
requests.exceptions.SSLError for content and iter_content. (#6057)
Fixed issue where invalid Windows registry entires caused proxy resolution
to raise an exception rather than ignoring the entry. (#6149)
Fixed issue where entire payload could be included in the error message for
JSONDecodeError. (#6036)

sybrenstuvel/python-rsa

`v4.9`

Remove debug logging from rsa/key.py
(#194).
Remove overlapping slots in PrivateKey and PublicKey.
(#189).
Do not include CHANGELOG/LICENSE/README.md in wheel
(#191).
Fixed Key Generation Unittest: Public and Private keys are assigned the wrong way around
([#188](https://togithub.com/sybrenstu

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* chore(deps): update all dependencies * remove protobuf * revert * pin geopandas for python 3.7 Co-authored-by: Anthonios Partheniou <partheniou@google.com>

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chore(deps): update all dependencies

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remove protobuf

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revert

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pin geopandas for python 3.7

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