Eliminate heatmap outputs in test since no way to set dynamically gen…

…erated output file names in tool config test name attribute - test coverage still good.
gregvonkuster · Dec 4, 2019 · 6040fcd · 6040fcd
1 parent 3abe7ed
commit 6040fcd
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Showing 3 changed files with 1 addition and 35 deletions.
diff --git a/tools/tag_pileup_frequency/tag_pileup_frequency.xml b/tools/tag_pileup_frequency/tag_pileup_frequency.xml
@@ -64,12 +64,8 @@ java -jar '$__tool_directory__/TagPileup.jar'
             <param name="proper_pe" value="false" />
             <param name="combine_strands" value="0" />
             <param name="composite_smoothing_window" value="0" />
-            <param name="output_heatmap" value="true" />
+            <param name="output_heatmap" value="false" />
             <output name="output1" file="output1.tabular" ftype="tabular" compare="contains"/>
-            <output_collection name="heatmaps" type="list">
-                <element name="dataset_2_dataset_1_read1_anti.tabular" file="input2_input1_read1_anti.tabular" ftype="tabular" compare="contains"/>
-                <element name="dataset_2_dataset_1_read1_sense.tabular" file="input2_input1_read1_sense.tabular" ftype="tabular" compare="contains"/>
-            </output_collection>
         </test>
     </tests>
     <help>

diff --git a/tools/tag_pileup_frequency/test-data/input2_input1_read1_anti.tabular b/tools/tag_pileup_frequency/test-data/input2_input1_read1_anti.tabular
diff --git a/tools/tag_pileup_frequency/test-data/input2_input1_read1_sense.tabular b/tools/tag_pileup_frequency/test-data/input2_input1_read1_sense.tabular