Remove some alleles from MHCnuggets #1133
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR removes single DP and DQ alpha and beta chain alleles from the list of supported alleles in MHCnuggets. This is because those alleles need to be defined by as a pair of alpha- and beta-chains in order to be meaningful. It also removes DRA alleles from the same list since the DR locus is defined only by the beta chain because functional variation in mature DRA gene products is absent.