Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Remove some alleles from MHCnuggets #1133

Merged
merged 1 commit into from
Aug 20, 2024
Merged

Conversation

susannasiebert
Copy link
Contributor

This PR removes single DP and DQ alpha and beta chain alleles from the list of supported alleles in MHCnuggets. This is because those alleles need to be defined by as a pair of alpha- and beta-chains in order to be meaningful. It also removes DRA alleles from the same list since the DR locus is defined only by the beta chain because functional variation in mature DRA gene products is absent.

@susannasiebert susannasiebert merged commit 9a2ca02 into staging Aug 20, 2024
6 checks passed
@susannasiebert susannasiebert deleted the mhcnuggets_alleles branch September 12, 2024 13:47
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant