keep qc files more tidy

griffithlab · Nov 16, 2024 · 80abd8a · 80abd8a
1 parent 0f46b51
commit 80abd8a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/_posts/0002-06-01-Alignment_QC.md b/_posts/0002-06-01-Alignment_QC.md
@@ -182,7 +182,7 @@ find *Rep*.bam -exec echo read_distribution.py  -i {} -r $RNA_HOME/refs/chr22_wi
 find *Rep*.bam -exec echo RNA_fragment_size.py -i {} -r $RNA_HOME/refs/chr22_with_ERCC92.bed12 \> rseqc/{}.frag_size.txt \; | sh
 
 # Summarizing mapping statistics of each BAM file
-find *Rep*.bam -exec echo bam_stat.py -i {} \> {}.bam_stat.txt \; | sh
+find *Rep*.bam -exec echo bam_stat.py -i {} \> rseqc/{}.bam_stat.txt \; | sh
 
 rm -f log.txt