Provide commands to create database file [Feature Request]

[chrisgulvik]

Can you provide example commands to create a database?

I'd like to make a super small db for built-in functionality testing of the software within a container. For example, just adding 2 different species genomes (perhaps just 1 Gram Pos here and 1 Gram Neg here) and querying with 1 of them. This would also speed up any dev work you do and make GitHub Actions a possibility for you. Nothing fancy needed for commands to share, just notes in shell would be helpful.

If you added an example on how to create a GTDB database, that would also take the workload off of you, ensure future utility of the pkg as taxonomy continues to change, and avoid future issues like #40 and #43 .

[chrisgulvik]

I just saw @jfy133 also ran into this same need here. It looks like simply making a dmd db isn't enough, so any tips?

[jfy133]

It might just be that particular genome being used during testing is not in the database (I'm not 100%) sure, so at least instructions would indeed be helpful :)