Code and data used to analyse the COVID-19 (SARS-COV-2) pandemic by Dr Gareth Davies (Gruff Davies).

Results published in 2 papers:

1. "The Epidemic Severity Index - Estimating Relative Local Severity of Novel Disease Outbreaks", Davies G https://doi.org/10.1101/2020.04.23.20077685

2. "Evidence Supports a Causal Model for Vitamin D in COVID-19 Outcomes", Davies G, Garami AR, Byers JC https://doi.org/{doi-tbc}

Code

Code is written in Matlab.

Data

Covid-19 death data from Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE) github repository.

World population 2020 by latitude from Center for International Earth Science Information Network - CIESIN - Columbia University. 2018. Gridded Population of the World, Version 4 (GPWv4): Population Count, Revision 11. Palisades, NY: NASA Socioeconomic Data and Applications Center (SEDAC). https://doi.org/10.7927/H4JW8BX5.

Contact Me

• w: gruffdavies.com
• t: @gruffdavies

Terms of Use

This GitHub repo is provided to the public for peer-review, educational and academic research purposes. All code and analyses are copyright Gruff Davies 2020 except where comments in the code specify specify that copyright belongs to another author. All rights are reserved. Please contact me if you wish to use any of the figures or results in this repo.