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18 Open 53 Closed
18 Open 53 Closed
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Issues list

Packages modified with treesapp package edit lineage_ids not compatiable withe treesapp evaluate bug Unexpected error raised? Weird results? Use this label.
#101 opened Oct 1, 2024 by janstett
@cmorganl
NCBI to GTDB lineage conversion feature request A request for a new feature unlike one that already exists
#100 opened Oct 1, 2024 by janstett
TreeSAPP classify bug for TaxIDs that have been merged bug Unexpected error raised? Weird results? Use this label.
#99 opened Oct 1, 2024 by janstett
@cmorganl
TreeSAPP Create Bug When Using Guarantee Flag bug Unexpected error raised? Weird results? Use this label.
#98 opened Oct 1, 2024 by janstett
@cmorganl
treesapp assign error bug Unexpected error raised? Weird results? Use this label.
#96 opened Aug 21, 2023 by Cayna26
@cmorganl
Guarantee compatibility between reference package components and rank recommendation feature request A request for a new feature unlike one that already exists
#95 opened Oct 9, 2022 by cmorganl
7 tasks
@cmorganl
Stitching fragmented ORFs feature request A request for a new feature unlike one that already exists
#91 opened Mar 26, 2022 by cmorganl
Getting error when running treesapp assign
#89 opened Dec 19, 2021 by melodymale
10
Query sequence coverage for treesapp abundance feature request A request for a new feature unlike one that already exists
#88 opened Jul 8, 2021 by cmorganl
1
Split reference sequences into different fasta files by their annotation from treesapp purity
#86 opened Apr 27, 2021 by cmorganl
Improve communication between purity and assign enhancement Highlight something that could be improved. Please be specific, TreeSAPP isn't perfect.
#83 opened Apr 10, 2021 by cmorganl
@cmorganl
Annotate domains in refpkg profile HMMs feature request A request for a new feature unlike one that already exists
#77 opened Mar 5, 2021 by cmorganl
6 tasks
Genome-wise reference packages feature request A request for a new feature unlike one that already exists
#69 opened Jan 15, 2021 by cmorganl
Removing off-target sequences without ODSeq
#68 opened Jan 15, 2021 by cmorganl
Replace BMGE with ClipKit enhancement Highlight something that could be improved. Please be specific, TreeSAPP isn't perfect.
#67 opened Jan 8, 2021 by cmorganl
2 of 4 tasks
1
@cmorganl
1
Accept multiple fasta files as input enhancement Highlight something that could be improved. Please be specific, TreeSAPP isn't perfect.
#60 opened Nov 24, 2020 by cmorganl 1.0.0
@cmorganl
Model testing enhancement Highlight something that could be improved. Please be specific, TreeSAPP isn't perfect. feature request A request for a new feature unlike one that already exists
#45 opened Feb 3, 2020 by cmorganl 1.0.0
@cmorganl
1
Taxonomic profiles feature request A request for a new feature unlike one that already exists
#32 opened Jul 18, 2019 by cmorganl 1.0.0
@cmorganl
1
ProTip! Find all open issues with in progress development work with linked:pr.