Update process_multiSample.py

hansenlab · Oct 9, 2024 · 6b71fcc · 6b71fcc
1 parent 761049b
commit 6b71fcc
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/mNSF/process_multiSample.py b/mNSF/process_multiSample.py
@@ -198,7 +198,7 @@ def ini_multiSample(list_D_,L_, lik = 'nb', disp = "default",chol=True):
  J_=list_D_[0]["Y"].shape[1]
  for ksample in range(0,nsample_):
  D=list_D_[ksample]
- fit=pf.ProcessFactorization(J_,L_,D['Z'],psd_kernel=ker,nonneg=True,lik=lik,disp = disp, chol = chol)
+ fit=pf.ProcessFactorization(J_,L_,D['Z'],X=list_X[ksample],psd_kernel=ker,nonneg=True,lik=lik,disp = disp, chol = chol)
  fit.init_loadings(D["Y"],X=D['X'],sz=D["sz"],shrinkage=0.3)
  list_fit_.append(fit)
  if ksample==0: